RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 C2CD2Q9Y426 696 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 STYXL1Q9Y6J8 313 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.71
TRAFD1-207ENST00000550051 TCHHQ07283 1943 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 TSC2P49815 1807 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 TRAK2O60296 914 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 NFICP08651 508 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 AVPR1AP37288 418 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 PXNP49023 591 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 GALK1P51570 392 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 ZNF268Q14587 947 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 TMEM132DQ14C87 1099 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 PDGFRLQ15198 375 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 TAF12Q16514 161 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 FBXO43Q4G163 708 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 MON1AQ86VX9 555 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 DCP1BQ8IZD4 617 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 MYCT1Q8N699 235 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 GIPC2Q8TF65 315 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 EXOC4Q96A65 974 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 CDK5RAP3Q96JB5 506 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 FIZ1Q96SL8 496 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 REEP2Q9BRK0 252 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 MSTO1Q9BUK6 570 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 SMG9Q9H0W8 520 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 EBF3Q9H4W6 596 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 PARVGQ9HBI0 331 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 VPS45Q9NRW7 570 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 WDR70Q9NW82 654 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 EBF1Q9UH73 591 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 OBSL1O75147 1896 aa10.64□□□□□ -0.71
TRAFD1-207ENST00000550051 VWA3AA6NCI4 1184 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 KPNA7A9QM74 516 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 KCNK5O95279 499 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 EGFP01133 1207 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 CCDC192P0DO97 292 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 ACOT2P49753 483 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 TAF6P49848 677 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 BFSP1Q12934 665 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 CCDC6Q16204 474 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 PLK5Q496M5 336 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 WSCD1Q658N2 575 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 SYT13Q7L8C5 426 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 NT5DC4Q86YG4 428 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 MAB21L3Q8N8X9 362 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 MYRFLQ96LU7 910 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 KIF2CQ99661 725 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 PYM1Q9BRP8 204 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 DUSP15Q9H1R2 295 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 DPP3Q9NY33 737 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 CCL26Q9Y258 94 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 KIF3AQ9Y496 699 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 PCDHB5Q9Y5E4 795 aa10.63□□□□□ -0.71
TRAFD1-207ENST00000550051 ZFHX4Q86UP3 3567 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 USP24Q9UPU5 2620 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 RNF40O75150 1001 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 FAM13AO94988 1023 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 CSH1P0DML2 217 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 CSH2P0DML3 217 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 GJA4P35212 333 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 MPLP40238 635 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 UBA7P41226 1012 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 NFE2Q16621 373 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 TXNDC8Q6A555 127 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 TRIM68Q6AZZ1 485 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 ADALQ6DHV7 355 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 CC2D1AQ6P1N0 951 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 CRELD2Q6UXH1 353 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 RIN3Q8TB24 985 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 LEO1Q8WVC0 666 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 MRPS31Q92665 395 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 CALML4Q96GE6 196 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 TRMT2BQ96GJ1 504 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 P2RY13Q9BPV8 354 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 ACBD6Q9BR61 282 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 ABCB6Q9NP58 842 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 BLOC1S4Q9NUP1 217 aa10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 ABI2Q9NYB9 513 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 AGO2Q9UKV8 859 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-207ENST00000550051 ANAPC1Q9H1A4 1944 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 BCLAF3A2AJT9 711 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 K7ENM7 598 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 PRPF40AO75400 957 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 NOL4O94818 638 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 PROS1P07225 676 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 ARSAP15289 507 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 NMT1P30419 496 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 DDIT3P35638 169 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 PNPLA4P41247 253 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 RPL10AP62906 217 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 FAM160A1Q05DH4 1040 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 KARSQ15046 597 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 POSTNQ15063 836 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 ELF2Q15723 593 aa10.61□□□□□ -0.71
TRAFD1-207ENST00000550051 SV2CQ496J9 727 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms