RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 KCNA1Q09470 495 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 RUNX3Q13761 415 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 CCDC6Q16204 474 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 SV2CQ496J9 727 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
RAB5C-205ENST00000550013 TXNDC8Q6A555 127 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 SCARA3Q6AZY7 606 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 ZNF720Q7Z2F6 126 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 DCP1BQ8IZD4 617 aaKnown RBP16.61■□□□□ 0.25
RAB5C-205ENST00000550013 KRI1Q8N9T8 703 aaKnown RBP16.61■□□□□ 0.25
RAB5C-205ENST00000550013 POMGNT1Q8WZA1 660 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 EPSTI1Q96J88 318 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 PI4K2AQ9BTU6 479 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 POLR3BQ9NW08 1133 aaPredicted RBP16.61■□□□□ 0.25
RAB5C-205ENST00000550013 MAGED2Q9UNF1 606 aaPredicted RBP16.61■□□□□ 0.25
RAB5C-205ENST00000550013 AXIN1O15169 862 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
RAB5C-205ENST00000550013 PPP1R37O75864 691 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 IL18RAPO95256 599 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 BMP15O95972 392 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 BFSP1Q12934 665 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 SF3A2Q15428 464 aaKnown RBP16.6■□□□□ 0.25
RAB5C-205ENST00000550013 TMEM196Q5HYL7 178 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 NAIF1Q69YI7 327 aaPredicted RBP16.6■□□□□ 0.25
RAB5C-205ENST00000550013 PDCL2Q8N4E4 241 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 FAM213AQ9BRX8 229 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 TDP1Q9NUW8 608 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 TBC1D7Q9P0N9 293 aa16.6■□□□□ 0.25
RAB5C-205ENST00000550013 LAMA1P25391 3075 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 MYO16Q9Y6X6 1858 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 EGFP01133 1207 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 KCNA4P22459 653 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
RAB5C-205ENST00000550013 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
RAB5C-205ENST00000550013 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
RAB5C-205ENST00000550013 TSPY1Q01534 308 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 POU5F1Q01860 360 aaKnown RBP16.59■□□□□ 0.25
RAB5C-205ENST00000550013 GRSF1Q12849 480 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAB5C-205ENST00000550013 PTPAQ15257 358 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 CCDC142Q17RM4 750 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 BRAPQ7Z569 592 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 KBTBD6Q86V97 674 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 GAB3Q8WWW8 586 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 SAAL1Q96ER3 474 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 STRA6Q9BX79 667 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 ARRDC1-AS1Q9H2J1 176 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 FBRSL1Q9HCM7 1045 aaKnown RBP16.59■□□□□ 0.25
RAB5C-205ENST00000550013 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 L1RE1Q9UN81 338 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 KIAA1549LQ6ZVL6 1849 aa16.59■□□□□ 0.25
RAB5C-205ENST00000550013 MYMKA6NI61 221 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 TRDMT1O14717 391 aaKnown RBP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 RNF40O75150 1001 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 TADA3O75528 432 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 RPP40O75818 363 aaKnown RBP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 ITGB3P05106 788 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 CSH1P0DML2 217 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 CSH2P0DML3 217 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 CYP2F1P24903 491 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 POSTNQ15063 836 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 DDR2Q16832 855 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 AASDHQ4L235 1098 aaPredicted RBP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 MON1AQ86VX9 555 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 C1orf127Q8N9H9 656 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 MRPS31Q92665 395 aaKnown RBP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 MRPL44Q9H9J2 332 aaKnown RBP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 KIF9Q9HAQ2 790 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 RXFP3Q9NSD7 469 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 DDX43Q9NXZ2 648 aaKnown RBP16.58■□□□□ 0.24
RAB5C-205ENST00000550013 SLC8A2Q9UPR5 921 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 USP24Q9UPU5 2620 aa16.58■□□□□ 0.24
RAB5C-205ENST00000550013 HCRTO43612 131 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 EPN2O95208 641 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 PNPLA4P41247 253 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 GALK1P51570 392 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 CASP5P51878 434 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 NFE2Q16621 373 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-205ENST00000550013 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
RAB5C-205ENST00000550013 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-205ENST00000550013 CACNA2D4Q7Z3S7 1137 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 OSTM1Q86WC4 334 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 NT5DC4Q86YG4 428 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 TTC16Q8NEE8 873 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-205ENST00000550013 DNAJC19Q96DA6 116 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 ACCSQ96QU6 501 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 SLC22A12Q96S37 553 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 STK17AQ9UEE5 414 aa16.57■□□□□ 0.24
RAB5C-205ENST00000550013 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 FOXD2O60548 495 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms