RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SPATA6Q9NWH7 488 aaPredicted RBP17.11■□□□□ 0.33
COX6A1-203ENST00000550009 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
COX6A1-203ENST00000550009 KIAA1549LQ6ZVL6 1849 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 SLC38A8A6NNN8 435 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 CCNE1P24864 410 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 RBP5P82980 135 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 INTS6LQ5JSJ4 861 aaKnown RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 ADGRF2Q8IZF7 708 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 KIAA0895Q8NCT3 520 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 CACTINQ8WUQ7 758 aaKnown RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 NKD2Q969F2 451 aaPredicted RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 CCDC127Q96BQ5 260 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 PAGE5Q96GU1 130 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 C2orf42Q9NWW7 574 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 GDAP2Q9NXN4 497 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 GTSE1Q9NYZ3 720 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
COX6A1-203ENST00000550009 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 PIAS3Q9Y6X2 628 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 LAMA1P25391 3075 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 OTOGLQ3ZCN5 2332 aa17.1■□□□□ 0.33
COX6A1-203ENST00000550009 RALGAPA1Q6GYQ0 2036 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 DNAH14Q0VDD8 3507 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 GVINP1Q7Z2Y8 2422 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 GABRDO14764 452 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 ZNF263O14978 683 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 HUS1O60921 280 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 F11P03951 625 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 PDGFRBP09619 1106 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 PFKFB1P16118 471 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 CYP24A1Q07973 514 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 STK4Q13043 487 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 MTAPQ13126 283 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 GAS6Q14393 721 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 SNRNP35Q16560 246 aaKnown RBP17.09■□□□□ 0.33
COX6A1-203ENST00000550009 TXNDC8Q6A555 127 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 LIMS2Q7Z4I7 341 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 MAB21L3Q8N8X9 362 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 SPPL2BQ8TCT7 592 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
COX6A1-203ENST00000550009 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 HPDLQ96IR7 371 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 ANKRD36BP1Q96IX9 119 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 SLC22A12Q96S37 553 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 CRTAC1Q9NQ79 661 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 ASB3Q9Y575 518 aa17.09■□□□□ 0.33
COX6A1-203ENST00000550009 OTOL1A6NHN0 477 aaPredicted RBP17.08■□□□□ 0.32
COX6A1-203ENST00000550009 PAX3P23760 479 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 PNPLA4P41247 253 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 TUFMP49411 452 aaKnown RBP17.08■□□□□ 0.32
COX6A1-203ENST00000550009 NLRP12P59046 1061 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 AMPD3Q01432 767 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 CSTF1Q05048 431 aaKnown RBP17.08■□□□□ 0.32
COX6A1-203ENST00000550009 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 ZNF852Q6ZMS4 543 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 DCP1BQ8IZD4 617 aaKnown RBP17.08■□□□□ 0.32
COX6A1-203ENST00000550009 DCLK2Q8N568 766 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 FAM3CQ92520 227 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 DNASE1L2Q92874 299 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 IRF7Q92985 503 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 CHFRQ96EP1 664 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 ACBD6Q9BR61 282 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 BCO2Q9BYV7 579 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 DPEP3Q9H4B8 488 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 GDPD2Q9HCC8 539 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 TMEM30AQ9NV96 361 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 HSFX1Q9UBD0 423 aa17.08■□□□□ 0.32
COX6A1-203ENST00000550009 TNNC2P02585 160 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 CACNA2D1P54289 1103 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 TSPY1Q01534 308 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 FCHO2Q0JRZ9 810 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
COX6A1-203ENST00000550009 ITIH5Q86UX2 942 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 TOP6BLQ8N6T0 577 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 DEPDC1BQ8WUY9 529 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 CYP2S1Q96SQ9 504 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 LRRC27Q9C0I9 530 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 TASP1Q9H6P5 420 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 LMAN1LQ9HAT1 526 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 HPSEQ9Y251 543 aa17.07■□□□□ 0.32
COX6A1-203ENST00000550009 SLFN14P0C7P3 912 aa17.06■□□□□ 0.32
COX6A1-203ENST00000550009 CHRNB1P11230 501 aa17.06■□□□□ 0.32
COX6A1-203ENST00000550009 TNNI1P19237 187 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms