RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RPP40O75818 363 aaKnown RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 F11P03951 625 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 CCDC192P0DO97 292 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 RPL10AP62906 217 aaKnown RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 SF3A1Q15459 793 aaKnown RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 C8orf34Q49A92 452 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 AASDHQ4L235 1098 aaPredicted RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 IL31Q6EBC2 164 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 C12orf50Q8NA57 414 aaPredicted RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 CACTINQ8WUQ7 758 aaKnown RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 LEO1Q8WVC0 666 aaPredicted RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 EBF3Q9H4W6 596 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 MRPL44Q9H9J2 332 aaKnown RBP14.62□□□□□ -0.07
TROAP-211ENST00000549891 ABCB6Q9NP58 842 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 C2orf42Q9NWW7 574 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 STK17AQ9UEE5 414 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 CCDC39Q9UFE4 941 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 SDK1Q7Z5N4 2213 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 EPG5Q9HCE0 2579 aa14.62□□□□□ -0.07
TROAP-211ENST00000549891 ANAPC1Q9H1A4 1944 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 TISP43B9A030 160 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 EXTL3O43909 919 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 HUS1O60921 280 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 AKAP3O75969 853 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 LDHAP00338 332 aaKnown RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 HMGA1P17096 107 aaKnown RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 DRD1P21728 446 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 CDR1P51861 262 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 LIMK1P53667 647 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 MYL7Q01449 175 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 ZNF268Q14587 947 aaPredicted RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 PDGFRLQ15198 375 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 FBXO43Q4G163 708 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 CRELD2Q6UXH1 353 aaPredicted RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 TMEM150AQ86TG1 271 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 MON1AQ86VX9 555 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 SFR1Q86XK3 245 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 EFCAB13Q8IY85 973 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 TMEM86AQ8N2M4 240 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 CAMKK1Q8N5S9 505 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 USP13Q92995 863 aaPredicted RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 ACBD6Q9BR61 282 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 PI4K2AQ9BTU6 479 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 HPS4Q9NQG7 708 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 MAGED2Q9UNF1 606 aaPredicted RBP14.61□□□□□ -0.07
TROAP-211ENST00000549891 CCL26Q9Y258 94 aa14.61□□□□□ -0.07
TROAP-211ENST00000549891 HELZP42694 1942 aaKnown RBP14.6□□□□□ -0.07
TROAP-211ENST00000549891 TULP1O00294 542 aaPredicted RBP14.6□□□□□ -0.07
TROAP-211ENST00000549891 AXIN1O15169 862 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 GDF9O60383 454 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 ZNF806P0C7X5 589 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 GAP43P17677 238 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 ADSSP30520 456 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 TXLNAP40222 546 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 TFAMQ00059 246 aaKnown RBP14.6□□□□□ -0.07
TROAP-211ENST00000549891 GRIN1Q05586 938 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 TXNDC8Q6A555 127 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 TRIM68Q6AZZ1 485 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 FSTL4Q6MZW2 842 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 DYMQ7RTS9 669 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 CPA6Q8N4T0 437 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 SPATA18Q8TC71 538 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 TRMT2BQ96GJ1 504 aaKnown RBP14.6□□□□□ -0.07
TROAP-211ENST00000549891 ACCSQ96QU6 501 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 FAM213AQ9BRX8 229 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 ARRDC1-AS1Q9H2J1 176 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 AGAP1Q9UPQ3 857 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 MYO16Q9Y6X6 1858 aa14.6□□□□□ -0.07
TROAP-211ENST00000549891 KMT2BQ9UMN6 2715 aaPredicted RBP14.59□□□□□ -0.07
TROAP-211ENST00000549891 RNF40O75150 1001 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 PPP1R37O75864 691 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 EPN2O95208 641 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 ITGB3P05106 788 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 POLR2BP30876 1174 aaKnown RBP14.59□□□□□ -0.07
TROAP-211ENST00000549891 RAP1GAPP47736 663 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 FAM160A1Q05DH4 1040 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 ALCAMQ13740 583 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 L1TD1Q5T7N2 865 aaKnown RBP14.59□□□□□ -0.07
TROAP-211ENST00000549891 PKN3Q6P5Z2 889 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 BRSK2Q8IWQ3 736 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 PDCL2Q8N4E4 241 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 FSIP1Q8NA03 581 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 CCDC26Q8TAB7 109 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 ATP2A3Q93084 1043 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 P2RY13Q9BPV8 354 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 STRA6Q9BX79 667 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 TMEM206Q9H813 350 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 TMLHEQ9NVH6 421 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 DDX43Q9NXZ2 648 aaKnown RBP14.59□□□□□ -0.07
TROAP-211ENST00000549891 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
TROAP-211ENST00000549891 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 R3HCC1Q9Y3T6 440 aaKnown RBP14.59□□□□□ -0.07
TROAP-211ENST00000549891 PCDHB13Q9Y5F0 798 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 PCDHGA5Q9Y5G8 931 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
TROAP-211ENST00000549891 CNOT1A5YKK6 2376 aaKnown RBP14.58□□□□□ -0.08
TROAP-211ENST00000549891 TRAV19A0A0A6YYK7 116 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms