RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 ATG14Q6ZNE5 492 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 SLC41A1Q8IVJ1 513 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 CMTM8Q8IZV2 173 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 ALLCQ8N6M5 410 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 ZNF713Q8N859 430 aaPredicted RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 TXNDC5Q8NBS9 432 aaKnown RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 TTC9Q92623 222 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 LENG9Q96B70 501 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 NAF1Q96HR8 494 aaKnown RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 PGLYRP2Q96PD5 576 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 GCNAQ96QF7 691 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 SLC26A6Q9BXS9 759 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 FZD8Q9H461 694 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 GOLGA2P5Q9HBQ8 144 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 NCOA5Q9HCD5 579 aaKnown RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 BARHL2Q9NY43 387 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 SEPT3Q9UH03 358 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 CCL26Q9Y258 94 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 SLC27A5Q9Y2P5 690 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 NID2Q14112 1375 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 C2CD3Q4AC94 2353 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 NBPF19A0A087WUL8 3843 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 TCRBV21S2A2A0A5A6 115 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 TERTO14746 1132 aaKnown RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 CPLX1O14810 134 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 PRPF3O43395 683 aaKnown RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 KLF8O95600 359 aaPredicted RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 CER1O95813 267 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 ZNF883P0CG24 379 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 CR2P20023 1033 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 MAOBP27338 520 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 CIITAP33076 1130 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 ACTN2P35609 894 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 USP11P51784 963 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 UCNP55089 124 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 EVCP57679 992 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 ANAPC15P60006 121 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 MRPS21P82921 87 aaKnown RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 SCRN1Q12765 414 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 NR1H3Q13133 447 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 RTP5Q14D33 572 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 EMC2Q15006 297 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 ZNF280DQ6N043 979 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 ITIH5Q86UX2 942 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 NOSTRINQ8IVI9 506 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 MAB21L3Q8N8X9 362 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 CCDC12Q8WUD4 166 aaPredicted RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 USP13Q92995 863 aaPredicted RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 PSMG2Q969U7 264 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 TDP1Q9NUW8 608 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 DUS2Q9NX74 493 aaKnown RBP9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 GDAQ9Y2T3 454 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 ASB3Q9Y575 518 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 NUB1Q9Y5A7 615 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 LRRK2Q5S007 2527 aa9.06□□□□□ -0.96
SMARCD1-207ENST00000549526 DENND4CQ5VZ89 1909 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 SGK1O00141 431 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 IFNAR1P17181 557 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 TIE1P35590 1138 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 MATKP42679 507 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 POU5F1BQ06416 359 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 TARDBPQ13148 414 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 NTRK3Q16288 839 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 TAF12Q16514 161 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 PTPRNQ16849 979 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 EOGTQ5NDL2 527 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 CPLX2Q6PUV4 134 aaKnown RBP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 IFNLR1Q8IU57 520 aaPredicted RBP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 TRIM22Q8IYM9 498 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 ENGASEQ8NFI3 743 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 ATP2A3Q93084 1043 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 ZNF274Q96GC6 653 aaPredicted RBP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 MTRQ99707 1265 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 LPIN3Q9BQK8 851 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 RNF26Q9BY78 433 aaPredicted RBP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 BTBD3Q9Y2F9 522 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 PPME1Q9Y570 386 aa9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 USP9YO00507 2555 aaPredicted RBP9.05□□□□□ -0.96
SMARCD1-207ENST00000549526 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 BRINP1O60477 761 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 NDUFS2O75306 463 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 PSMD10O75832 226 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 SOAT2O75908 522 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 AFPP02771 609 aaKnown RBP9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 OR4Q2P0C623 313 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 MARCKSP29966 332 aaPredicted RBP9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 CDC25CP30307 473 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 QARSP47897 775 aaKnown RBP9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 IFNAR2P48551 515 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 CLDN6P56747 220 aa9.04□□□□□ -0.96
SMARCD1-207ENST00000549526 SSRP1Q08945 709 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms