RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 LLGL1Q15334 1064 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 PGS1Q32NB8 556 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
CCDC38-206ENST00000548771 ANKRD16Q6P6B7 361 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 MAVSQ7Z434 540 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 CATIPQ7Z7H3 387 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 FAM46DQ8NEK8 389 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 ATRIPQ8WXE1 791 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 HSPBAP1Q96EW2 488 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 SMAD5Q99717 465 aaKnown RBP5.2□□□□□ -1.58
CCDC38-206ENST00000548771 BRINP2Q9C0B6 783 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 ARHGEF3Q9NR81 526 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 PCDHA1Q9Y5I3 950 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 M0QYG6 137 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 NHLRC4P0CG21 123 aaPredicted RBP5.19□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF81P51508 661 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
CCDC38-206ENST00000548771 ATAT1Q5SQI0 421 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF618Q5T7W0 954 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 ICE2Q659A1 982 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 TMEM108Q6UXF1 575 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
CCDC38-206ENST00000548771 SMG7Q92540 1137 aaKnown RBP5.19□□□□□ -1.58
CCDC38-206ENST00000548771 TBC1D5Q92609 795 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 HPS3Q969F9 1004 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 CHMP4CQ96CF2 233 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 MVB12AQ96EY5 273 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 SLC46A1Q96NT5 459 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 NUP88Q99567 741 aaPredicted RBP5.19□□□□□ -1.58
CCDC38-206ENST00000548771 DLL3Q9NYJ7 618 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 SH2B3Q9UQQ2 575 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 CACNA1IQ9P0X4 2223 aa5.19□□□□□ -1.58
CCDC38-206ENST00000548771 WDR91A4D1P6 747 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 H0YIZ8 118 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 JTBO76095 146 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 NXPH3O95157 252 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 GNAI2P04899 355 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 EXOSC9Q06265 439 aaKnown RBP5.18□□□□□ -1.58
CCDC38-206ENST00000548771 EIF2B5Q13144 721 aaKnown RBP5.18□□□□□ -1.58
CCDC38-206ENST00000548771 SLC44A4Q53GD3 710 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 AARS2Q5JTZ9 985 aaKnown RBP5.18□□□□□ -1.58
CCDC38-206ENST00000548771 TEDDM1Q5T9Z0 273 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 SUMO4Q6EEV6 95 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 C11orf87Q6NUJ2 197 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 CEP85Q6P2H3 762 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 WDR53Q7Z5U6 358 aaPredicted RBP5.18□□□□□ -1.58
CCDC38-206ENST00000548771 PLBD2Q8NHP8 589 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 SLC29A3Q9BZD2 475 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 SEMA4CQ9C0C4 833 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 HOMER2Q9NSB8 354 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 LUC7L2Q9Y383 392 aaKnown RBP5.18□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF804BA4D1E1 1349 aa5.18□□□□□ -1.58
CCDC38-206ENST00000548771 MYO1FO00160 1098 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 ERC2O15083 957 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 SLC16A3O15427 465 aaKnown RBP5.17□□□□□ -1.58
CCDC38-206ENST00000548771 TLR5O60602 858 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 ALDH2P05091 517 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 IL6RP08887 468 aaPredicted RBP5.17□□□□□ -1.58
CCDC38-206ENST00000548771 EBLN1P0CF75 366 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 PPIFP30405 207 aaKnown RBP5.17□□□□□ -1.58
CCDC38-206ENST00000548771 LIPAP38571 399 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 LOXL3P58215 753 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 LONRF3Q496Y0 759 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF66Q6ZN08 573 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 VGLL2Q8N8G2 317 aa5.17□□□□□ -1.58
CCDC38-206ENST00000548771 TISP43B9A030 160 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 PROB1E7EW31 1015 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 ADAMTS3O15072 1205 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 ABLIM3O94929 683 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 ONECUT2O95948 504 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 ATXN1LP0C7T5 689 aaKnown RBP5.16□□□□□ -1.58
CCDC38-206ENST00000548771 NDUFB7P17568 137 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 SOX8P57073 446 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 GRM1Q13255 1194 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 BRIX1Q8TDN6 353 aaKnown RBP5.16□□□□□ -1.58
CCDC38-206ENST00000548771 SLC35A4Q96G79 324 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 PTDSS2Q9BVG9 487 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 SLC12A5Q9H2X9 1139 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 DUSP22Q9NRW4 184 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 BTBD3Q9Y2F9 522 aa5.16□□□□□ -1.58
CCDC38-206ENST00000548771 H3BUI4 141 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 TJP3O95049 919 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 IL33O95760 270 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 PRR35P0CG20 571 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 VCAM1P19320 739 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 ALDH9A1P49189 494 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 IQCB1Q15051 598 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 EZH2Q15910 746 aaKnown RBP5.15□□□□□ -1.59
CCDC38-206ENST00000548771 GPATCH3Q96I76 525 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 CDK5RAP3Q96JB5 506 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 MRGPRX1Q96LB2 322 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 MED16Q9Y2X0 877 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 PLEKHM1Q9Y4G2 1056 aa5.15□□□□□ -1.59
CCDC38-206ENST00000548771 A0A088AWK7 358 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 TP73O15350 636 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 UNC5CO95185 931 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 CYP2C18P33260 490 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 VIPR2P41587 438 aa5.14□□□□□ -1.59
CCDC38-206ENST00000548771 PXNP49023 591 aaPredicted RBP5.14□□□□□ -1.59
CCDC38-206ENST00000548771 NEK2P51955 445 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms