RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 ACOT1Q86TX2 421 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 SCLYQ96I15 445 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 RNF14Q9UBS8 474 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 DNAH12Q6ZR08 3092 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 TTC3P53804 2025 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 GABRDO14764 452 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 EFCAB14O75071 495 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 B3GAT3O94766 335 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 CYP11A1P05108 521 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 RRM1P23921 792 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 SSTR3P32745 418 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-204ENST00000548068 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB5B-204ENST00000548068 BCAT1P54687 386 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 GSCP56915 257 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-204ENST00000548068 SLC8A3P57103 927 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 PTP4A2Q12974 167 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 LRRC26Q2I0M4 334 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 WSCD1Q658N2 575 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 PLEKHA7Q6IQ23 1121 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 UBL4BQ8N7F7 174 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 PBKQ96KB5 322 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 OSBPL9Q96SU4 736 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 TLR10Q9BXR5 811 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 TBC1D13Q9NVG8 400 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 COG5Q9UP83 839 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
RAB5B-204ENST00000548068 M0QZQ0 153 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 MYO1FO00160 1098 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 PFKMP08237 780 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 FGFR1P11362 822 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 TYMPP19971 482 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 SLC1A1P43005 524 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 GPD2P43304 727 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 GABRB2P47870 512 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
RAB5B-204ENST00000548068 PDCLQ13371 301 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-204ENST00000548068 CLUL1Q15846 466 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 PPP1R26Q5T8A7 1209 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-204ENST00000548068 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 DEFB128Q7Z7B8 93 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 NT5DC3Q86UY8 548 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 C3orf58Q8NDZ4 430 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 STK32AQ8WU08 396 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 C18orf8Q96DM3 657 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 PRDM10Q9NQV6 1147 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
RAB5B-204ENST00000548068 CDH9Q9ULB4 789 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
RAB5B-204ENST00000548068 UQCRHLA0A096LP55 91 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 ABHD14A-ACY1A0A1B0GW23 586 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 CTAGE15A4D2H0 777 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 NCK2O43639 380 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 SPOPO43791 374 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 TIMP1P01033 207 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 UQCRHP07919 91 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 CTAGE8P0CG41 777 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 PTPN1P18031 435 aaKnown RBP13.08□□□□□ -0.32
RAB5B-204ENST00000548068 MAN1A1P33908 653 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 PAFAH1B1P43034 410 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 ACADSBP45954 432 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 MAMLD1Q13495 774 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 MESDQ14696 234 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 PTPN20Q4JDL3 420 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 TIGD5Q53EQ6 642 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 CTAGE6Q86UF2 777 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 THEM5Q8N1Q8 247 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 LRRC43Q8N309 656 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 TMEM199Q8N511 208 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 WDTC1Q8N5D0 677 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 ANKRD52Q8NB46 1076 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
RAB5B-204ENST00000548068 FEZF2Q8TBJ5 459 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 HES6Q96HZ4 224 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.32
RAB5B-204ENST00000548068 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
RAB5B-204ENST00000548068 CARD6Q9BX69 1037 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms