RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 TRIM65Q6PJ69 517 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 CYP26C1Q6V0L0 522 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 LRRTM3Q86VH5 581 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 B3GALNT2Q8NCR0 500 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 VPS16Q9H269 839 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 CYP4F11Q9HBI6 524 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 ABCB6Q9NP58 842 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 NME7Q9Y5B8 376 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 PCDHB5Q9Y5E4 795 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 HELZP42694 1942 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 GOLGA6L19H0YKK7 550 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 H3BQ06 376 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CILPO75339 1184 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 VNN2O95498 520 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 PON1P27169 355 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 NDST1P52848 882 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 PSMC1P62191 440 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 LRMPQ12912 555 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 PLD1Q13393 1074 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 SMAD4Q13485 552 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CFAP221Q4G0U5 840 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 FKBP15Q5T1M5 1219 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 SMYD5Q6GMV2 418 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CES5AQ6NT32 575 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 C4orf50Q6ZRC1 276 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 LUZP1Q86V48 1076 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 PPM1KQ8N3J5 372 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 MYCBPAPQ8TBZ2 947 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 ARID3AQ99856 593 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 NT5C1AQ9BXI3 368 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CRTAC1Q9NQ79 661 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CISHQ9NSE2 258 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 APEX2Q9UBZ4 518 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 GTF3C4Q9UKN8 822 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 INSL5Q9Y5Q6 135 aa12.13□□□□□ -0.47
CALCOCO1-208ENST00000547988 CCDC195A0A1B0GUA6 201 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 MYBPHLA2RUH7 354 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 LGALS16A8MUM7 142 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 ATP2C2O75185 946 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 RFPL2O75678 378 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 SEC24AO95486 1093 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 LRG1P02750 347 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 PTPN1P18031 435 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 CD58P19256 250 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 SLC9A1P19634 815 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 TUFMP49411 452 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 DUSP4Q13115 394 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 PHLDB3Q6NSJ2 640 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 GPR149Q86SP6 731 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 CRYBG2Q8N1P7 616 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 UBR7Q8N806 425 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 PCED1BQ96HM7 432 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 PRKD2Q9BZL6 878 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 S1PR5Q9H228 398 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 PRDM6Q9NQX0 595 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 TMLHEQ9NVH6 421 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 ABI2Q9NYB9 513 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 FAM50BQ9Y247 325 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 UNC80Q8N2C7 3258 aa12.12□□□□□ -0.47
CALCOCO1-208ENST00000547988 ATP8B3O60423 1300 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MBTPS2O43462 519 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 XYLBO75191 536 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 RFX1P22670 979 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MTHFRP42898 656 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MAGEA11P43364 429 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MFAP3P55082 362 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MRPS5P82675 430 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 CYP27A1Q02318 531 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 TFF2Q03403 129 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 KCNMA1Q12791 1236 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 CLUL1Q15846 466 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
CALCOCO1-208ENST00000547988 MDH1BQ5I0G3 518 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms