RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 LAIR1Q6GTX8 287 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 CMTM8Q8IZV2 173 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 PDCL2Q8N4E4 241 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 CELF5Q8N6W0 485 aaKnown RBP21.92■■□□□ 1.1
SSH1-207ENST00000547862 C1orf127Q8N9H9 656 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 CBWD1Q9BRT8 395 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 THG1LQ9NWX6 298 aaKnown RBP21.92■■□□□ 1.1
SSH1-207ENST00000547862 DDX43Q9NXZ2 648 aaKnown RBP21.92■■□□□ 1.1
SSH1-207ENST00000547862 L1RE1Q9UN81 338 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 CCL26Q9Y258 94 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 ANAPC1Q9H1A4 1944 aa21.92■■□□□ 1.1
SSH1-207ENST00000547862 HUS1O60921 280 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 PNPLA4P41247 253 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 MLLT6P55198 1093 aaPredicted RBP21.91■■□□□ 1.1
SSH1-207ENST00000547862 NLRP12P59046 1061 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 ITPRIPL2Q3MIP1 535 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 DGKKQ5KSL6 1271 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 SCARA3Q6AZY7 606 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 NT5DC4Q86YG4 428 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 PDILTQ8N807 584 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 STRA6Q9BX79 667 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 MTMR12Q9C0I1 747 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 TRPC7Q9HCX4 862 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 PANK4Q9NVE7 773 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.91■■□□□ 1.1
SSH1-207ENST00000547862 MYO16Q9Y6X6 1858 aa21.91■■□□□ 1.1
SSH1-207ENST00000547862 A0A087X0B3 334 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 K7ESF4 209 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 HCRTO43612 131 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 PRPF6O94906 941 aaKnown RBP21.9■■□□□ 1.1
SSH1-207ENST00000547862 TMEM191BP0C7N4 346 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 SYT1P21579 422 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 SMARCB1Q12824 385 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 DDR2Q16832 855 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 TXNDC8Q6A555 127 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 CCDC73Q6ZRK6 1079 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 CEP68Q76N32 757 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 TMEM150AQ86TG1 271 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 OSTM1Q86WC4 334 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 CSGALNACT2Q8N6G5 542 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 MRPS31Q92665 395 aaKnown RBP21.9■■□□□ 1.1
SSH1-207ENST00000547862 USP28Q96RU2 1077 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 EBF3Q9H4W6 596 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 PDE11AQ9HCR9 933 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 GKN1Q9NS71 199 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 PCDHB13Q9Y5F0 798 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 SNX9Q9Y5X1 595 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 GREB1Q4ZG55 1949 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 KIAA1549LQ6ZVL6 1849 aa21.9■■□□□ 1.1
SSH1-207ENST00000547862 EML5Q05BV3 1969 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 HMGA1P17096 107 aaKnown RBP21.89■■□□□ 1.09
SSH1-207ENST00000547862 ATXN1P54253 815 aaKnown RBP21.89■■□□□ 1.09
SSH1-207ENST00000547862 MYL7Q01449 175 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 INTS6LQ5JSJ4 861 aaKnown RBP21.89■■□□□ 1.09
SSH1-207ENST00000547862 PKN3Q6P5Z2 889 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 MAMSTRQ6ZN01 415 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 ADGRF2Q8IZF7 708 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 CACTINQ8WUQ7 758 aaKnown RBP21.89■■□□□ 1.09
SSH1-207ENST00000547862 USP13Q92995 863 aaPredicted RBP21.89■■□□□ 1.09
SSH1-207ENST00000547862 HPS4Q9NQG7 708 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 OLFML3Q9NRN5 406 aa21.89■■□□□ 1.09
SSH1-207ENST00000547862 PTPRDP23468 1912 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 DCDC2BA2VCK2 349 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 HRO43593 1189 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 LDHAP00338 332 aaKnown RBP21.88■■□□□ 1.09
SSH1-207ENST00000547862 F11P03951 625 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 CSH1P0DML2 217 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 CSH2P0DML3 217 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 ARSAP15289 507 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 GARTP22102 1010 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 TGM1P22735 817 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 CYP2F1P24903 491 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 PXNP49023 591 aaPredicted RBP21.88■■□□□ 1.09
SSH1-207ENST00000547862 POU5F1Q01860 360 aaKnown RBP21.88■■□□□ 1.09
SSH1-207ENST00000547862 CCINQ13939 588 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 NFE2Q16621 373 aaPredicted RBP21.88■■□□□ 1.09
SSH1-207ENST00000547862 LONP2Q86WA8 852 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 SCN4BQ8IWT1 228 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 RIN3Q8TB24 985 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 GTF3C4Q9UKN8 822 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 ITGA11Q9UKX5 1188 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 SPAG17Q6Q759 2223 aa21.88■■□□□ 1.09
SSH1-207ENST00000547862 PRR5-ARHGAP8B1AHC4 643 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 EXTL3O43909 919 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 TADA3O75528 432 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 KCNA4P22459 653 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 DDX6P26196 483 aaKnown RBP eCLIP21.87■■□□□ 1.09
SSH1-207ENST00000547862 ARHGAP8P85298 464 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 ALCAMQ13740 583 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 RUNX3Q13761 415 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 CC2D1AQ6P1N0 951 aaPredicted RBP21.87■■□□□ 1.09
SSH1-207ENST00000547862 SPATA2LQ8IUW3 424 aaPredicted RBP21.87■■□□□ 1.09
SSH1-207ENST00000547862 GPD1LQ8N335 351 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 LRRC52Q8N7C0 313 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 GLIS3Q8NEA6 775 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 HPS3Q969F9 1004 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 KIF9Q9HAQ2 790 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 R3HCC1Q9Y3T6 440 aaKnown RBP21.87■■□□□ 1.09
SSH1-207ENST00000547862 NCOR2Q9Y618 2525 aa21.87■■□□□ 1.09
SSH1-207ENST00000547862 PTPRJQ12913 1337 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms