RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SART1O43290 800 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 NFICP08651 508 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 ACO1P21399 889 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 COMTP21964 271 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 KYAT1Q16773 422 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 SLC27A1Q6PCB7 646 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 FAM71BQ8TC56 605 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 CASKIN2Q8WXE0 1202 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 NAP1L3Q99457 506 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 EIF2AQ9BY44 585 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 CELF4Q9BZC1 486 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 UVRAGQ9P2Y5 699 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 MTUS1Q9ULD2 1270 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 NFU1Q9UMS0 254 aa17.58■□□□□ 0.4
CHMP1A-204ENST00000547687 TTC3P53804 2025 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 CLSTN1O94985 981 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 GJB5O95377 273 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 UNGP13051 313 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 TBXAS1P24557 533 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 NOP14P78316 857 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ADGRE1Q14246 886 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 DCAF4L1Q3SXM0 396 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 JADE1Q6IE81 842 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ALG3Q92685 438 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ANKRD36BP1Q96IX9 119 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ACAP3Q96P50 834 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 DDX47Q9H0S4 455 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 NUB1Q9Y5A7 615 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 PCDHB4Q9Y5E5 795 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 TRPV2Q9Y5S1 764 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 NLRC5Q86WI3 1866 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 M0QZ92 97 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 TNNC2P02585 160 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 GRM5P41594 1212 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 MYL6P60660 151 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 TAP1Q03518 808 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ZNF211Q13398 564 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 NNTQ13423 1086 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 CLUL1Q15846 466 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 PPM1EQ8WY54 764 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ARNTL2Q8WYA1 636 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ZSWIM1Q9BR11 485 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 SLITRK6Q9H5Y7 841 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 ASB7Q9H672 318 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 VPS18Q9P253 973 aa17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 CNOT8Q9UFF9 292 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 PIN4Q9Y237 131 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 COL4A4P53420 1690 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-204ENST00000547687 SYF2O95926 243 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 ASS1P00966 412 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 AMHP03971 560 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 IGFBP4P22692 258 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 AXLP30530 894 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 TRPC3Q13507 836 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 TMEM130Q8N3G9 435 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 MAFAQ8NHW3 353 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 CCDC26Q8TAB7 109 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 BTBD6Q96KE9 485 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 IMPG2Q9BZV3 1241 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 HES2Q9Y543 173 aa17.56■□□□□ 0.4
CHMP1A-204ENST00000547687 GYS2P54840 703 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 TRADDQ15628 312 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 TMEM270Q6UE05 265 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 MAATS1Q7Z4T9 603 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 MCOLN2Q8IZK6 566 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 CPA5Q8WXQ8 436 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 KRT35Q92764 455 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 SNTG2Q9NY99 539 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 CNTN6Q9UQ52 1028 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 FAN1Q9Y2M0 1017 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 MYO7AQ13402 2215 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 GOLGA6BA6NDN3 693 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 EFCAB14O75071 495 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 GGCXP38435 758 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 PEX5P50542 639 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 SGSM1Q2NKQ1 1148 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 NAA35Q5VZE5 725 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 ZNF771Q7L3S4 317 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 APBB1IPQ7Z5R6 666 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 C1orf127Q8N9H9 656 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 LINC01599Q8WXQ3 324 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 AMACRQ9UHK6 382 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 PRDM4Q9UKN5 801 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 PADI3Q9ULW8 664 aa17.55■□□□□ 0.4
CHMP1A-204ENST00000547687 AGPSO00116 658 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 SPOPO43791 374 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 CYP1A1P04798 512 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 KRT19P08727 400 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 FAM153BP0C7A2 387 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 MYBL1P10243 752 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 FAM153CQ494X1 144 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 FAM228AQ86W67 206 aa17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 EIF1ADQ8N9N8 165 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-204ENST00000547687 RBBP8NLQ8NC74 664 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms