RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NCOA4Q13772 614 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
DDX54-204ENST00000546898 CFAP221Q4G0U5 840 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 C4orf50Q6ZRC1 276 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 DNAJB7Q7Z6W7 309 aaPredicted RBP17.01■□□□□ 0.31
DDX54-204ENST00000546898 FAM200AQ8TCP9 573 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 TAF4BQ92750 862 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 TSG101Q99816 390 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 WNT16Q9UBV4 365 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 GTF3C4Q9UKN8 822 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 ZNF638Q14966 1978 aaKnown RBP17■□□□□ 0.31
DDX54-204ENST00000546898 CETN3O15182 167 aa17■□□□□ 0.31
DDX54-204ENST00000546898 VNN1O95497 513 aa17■□□□□ 0.31
DDX54-204ENST00000546898 MCCD1P59942 119 aaPredicted RBP17■□□□□ 0.31
DDX54-204ENST00000546898 UBE2HP62256 183 aa17■□□□□ 0.31
DDX54-204ENST00000546898 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
DDX54-204ENST00000546898 STIM1Q13586 685 aa17■□□□□ 0.31
DDX54-204ENST00000546898 TAF12Q16514 161 aa17■□□□□ 0.31
DDX54-204ENST00000546898 ZNF667Q5HYK9 610 aa17■□□□□ 0.31
DDX54-204ENST00000546898 FAM171BQ6P995 826 aa17■□□□□ 0.31
DDX54-204ENST00000546898 SPATA2LQ8IUW3 424 aaPredicted RBP17■□□□□ 0.31
DDX54-204ENST00000546898 SHKBP1Q8TBC3 707 aa17■□□□□ 0.31
DDX54-204ENST00000546898 ELSPBP1Q96BH3 223 aa17■□□□□ 0.31
DDX54-204ENST00000546898 LPIN3Q9BQK8 851 aa17■□□□□ 0.31
DDX54-204ENST00000546898 PI4K2AQ9BTU6 479 aa17■□□□□ 0.31
DDX54-204ENST00000546898 SNX25Q9H3E2 840 aa17■□□□□ 0.31
DDX54-204ENST00000546898 A0A1W2PRU2 124 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 MYBPHLA2RUH7 354 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 HCRTO43612 131 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 CLSTN1O94985 981 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 CFHP08603 1231 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 P4HA1P13674 534 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 CDC25CP30307 473 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 MAGEA11P43364 429 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 LRRC63Q05C16 580 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 TEAD2Q15562 447 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 SGSM1Q2NKQ1 1148 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 C1orf220Q5T0J3 134 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 POTEHQ6S545 545 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 ADSSL1Q8N142 457 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
DDX54-204ENST00000546898 SMARCD2Q92925 531 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 ASB16Q96NS5 453 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 GCNAQ96QF7 691 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 KXD1Q9BQD3 176 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 MRPL45Q9BRJ2 306 aaKnown RBP16.99■□□□□ 0.31
DDX54-204ENST00000546898 MFSD1Q9H3U5 465 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 TRPV4Q9HBA0 871 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 ZNF334Q9HCZ1 680 aaPredicted RBP16.99■□□□□ 0.31
DDX54-204ENST00000546898 NXF1Q9UBU9 619 aaKnown RBP16.99■□□□□ 0.31
DDX54-204ENST00000546898 ZMYM5Q9UJ78 669 aa16.99■□□□□ 0.31
DDX54-204ENST00000546898 MIA3Q5JRA6 1907 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 NRG2O14511 850 aaPredicted RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 PSMA7O14818 248 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 SLC16A3O15427 465 aaKnown RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 PDGFBP01127 241 aaPredicted RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 CSH1P0DML2 217 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 CSH2P0DML3 217 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 EPB41P11171 864 aaKnown RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 GJA1P17302 382 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 FCARP24071 287 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 LMO2P25791 158 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 GABRR2P28476 465 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 PIK3CAP42336 1068 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 PSMC1P62191 440 aaKnown RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 PFKPQ01813 784 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 FAM78AQ5JUQ0 283 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 VSTM1Q6UX27 236 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 GAREM2Q75VX8 874 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 ZC3H3Q8IXZ2 948 aaKnown RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 OR6B3Q8NGW1 331 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 MYLPFQ96A32 169 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 E2F7Q96AV8 911 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 CEP295NLQ96MC4 621 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 RPP25Q9BUL9 199 aaKnown RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 IMPG2Q9BZV3 1241 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 SLITRK6Q9H5Y7 841 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 ZFP14Q9HCL3 533 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 CRTAC1Q9NQ79 661 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 MAGEC2Q9UBF1 373 aaPredicted RBP16.98■□□□□ 0.31
DDX54-204ENST00000546898 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 COL4A2P08572 1712 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 ANAPC1Q9H1A4 1944 aa16.98■□□□□ 0.31
DDX54-204ENST00000546898 KIF26AQ9ULI4 1882 aaPredicted RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 MYH10P35580 1976 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 A8MXQ7 604 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 STX10O60499 249 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 ASS1P00966 412 aaKnown RBP16.97■□□□□ 0.31
DDX54-204ENST00000546898 HLA-DRAP01903 254 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 TRIM49P0CI25 452 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 TRIM49CP0CI26 452 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 CCNE1P24864 410 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 CYP2F1P24903 491 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 GTF2H1P32780 548 aa16.97■□□□□ 0.31
DDX54-204ENST00000546898 CDR1P51861 262 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms