RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPNE8-204ENST00000546603 VWC2LB2RUY7 222 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 PROP1O75360 226 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 URI1O94763 535 aaPredicted RBP7.14□□□□□ -1.27
CPNE8-204ENST00000546603 C1RP00736 705 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 RHOP08100 348 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 WT1P19544 449 aaPredicted RBP7.14□□□□□ -1.27
CPNE8-204ENST00000546603 SOX10P56693 466 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 LOXL3P58215 753 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 PPP2R5AQ15172 486 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 MINDY4Q4G0A6 757 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 ANO6Q4KMQ2 910 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 PLAC9Q5JTB6 97 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 FAM102BQ5T8I3 360 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 TEDDM1Q5T9Z0 273 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 VPS53Q5VIR6 699 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 ICE2Q659A1 982 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 RAVER1Q8IY67 606 aaKnown RBP7.14□□□□□ -1.27
CPNE8-204ENST00000546603 ANKRD13AQ8IZ07 590 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 CELF5Q8N6W0 485 aaKnown RBP7.14□□□□□ -1.27
CPNE8-204ENST00000546603 ZBTB34Q8NCN2 500 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 PPP1R35Q8TAP8 253 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 IL17RBQ9NRM6 502 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 STAP2Q9UGK3 403 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 EID1Q9Y6B2 187 aa7.14□□□□□ -1.27
CPNE8-204ENST00000546603 LINC00473A8K010 186 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 GCOM1H8Y6P7 765 aaPredicted RBP7.13□□□□□ -1.27
CPNE8-204ENST00000546603 MYO1CO00159 1063 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 TUSC2O75896 110 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 TTLL1O95922 423 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 NR2F6P10588 404 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 VIPR2P41587 438 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 PXNP49023 591 aaPredicted RBP7.13□□□□□ -1.27
CPNE8-204ENST00000546603 AGFG1P52594 562 aaKnown RBP7.13□□□□□ -1.27
CPNE8-204ENST00000546603 ZNF134P52741 427 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 BMPR2Q13873 1038 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 ATRIPQ8WXE1 791 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 RFKQ969G6 155 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 PTDSS2Q9BVG9 487 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 ASB6Q9NWX5 421 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 XPR1Q9UBH6 696 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 TCEAL9Q9UHQ7 104 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 NOB1Q9ULX3 412 aaKnown RBP7.13□□□□□ -1.27
CPNE8-204ENST00000546603 TMX2Q9Y320 296 aa7.13□□□□□ -1.27
CPNE8-204ENST00000546603 KAT6AQ92794 2004 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 A0A1W2PPL8 197 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 DCLK1O15075 740 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 MARCH6O60337 910 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 NXPH3O95157 252 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 ELFN1P0C7U0 828 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 CYP2C9P11712 490 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 ZFXP17010 805 aaPredicted RBP7.12□□□□□ -1.27
CPNE8-204ENST00000546603 GPD1P21695 349 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 SATB1Q01826 763 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 TBCCQ15814 346 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 FAM153CQ494X1 144 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 TSTD2Q5T7W7 516 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 NXNQ6DKJ4 435 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 DTX2Q86UW9 622 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.12□□□□□ -1.27
CPNE8-204ENST00000546603 KBTBD7Q8WVZ9 684 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 JDP2Q8WYK2 163 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 HAPLN3Q96S86 360 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 CPNE5Q9HCH3 593 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 ARPP21Q9UBL0 812 aaPredicted RBP7.12□□□□□ -1.27
CPNE8-204ENST00000546603 SHOC2Q9UQ13 582 aa7.12□□□□□ -1.27
CPNE8-204ENST00000546603 MASP2O00187 686 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 PPM1DO15297 605 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 C1QL1O75973 258 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 SCGB1D2O95969 90 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 XRCC6P12956 609 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPNE8-204ENST00000546603 PPIFP30405 207 aaKnown RBP7.11□□□□□ -1.27
CPNE8-204ENST00000546603 UCP3P55916 312 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 NHLH1Q02575 133 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 KRTAP5-3Q6L8H2 238 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 OVCH2Q7RTZ1 564 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 TCEAL8Q8IYN2 117 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 ZNF384Q8TF68 577 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 NTN5Q8WTR8 489 aaPredicted RBP7.11□□□□□ -1.27
CPNE8-204ENST00000546603 RUNDC1Q96C34 613 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
CPNE8-204ENST00000546603 TMEM60Q9H2L4 133 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 C1orf112Q9NSG2 853 aa7.11□□□□□ -1.27
CPNE8-204ENST00000546603 ERC2O15083 957 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 TLR5O60602 858 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 SLC11A2P49281 568 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 ARFIP2P53365 341 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 LILRA4P59901 499 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 LRRC41Q15345 812 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 ZNF618Q5T7W0 954 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 LMBRD2Q68DH5 695 aaPredicted RBP7.1□□□□□ -1.27
CPNE8-204ENST00000546603 NPNTQ6UXI9 565 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 ZNF783Q6ZMS7 281 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 SARAFQ96BY9 339 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 TRIM54Q9BYV2 358 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 SERTAD4Q9NUC0 356 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 DKK3Q9UBP4 350 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 ST3GAL5Q9UNP4 418 aa7.1□□□□□ -1.27
CPNE8-204ENST00000546603 LRRC3CA6NJW4 275 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms