RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 MAML3Q96JK9 1138 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 KLHL4Q9C0H6 718 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 GBA3Q9H227 469 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 TUFT1Q9NNX1 390 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 TBCCD1Q9NVR7 557 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 PI4KBQ9UBF8 816 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 ZNF212Q9UDV6 495 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 ZFP69BQ9UJL9 534 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 PCDHA3Q9Y5H8 950 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 MATN2O00339 956 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 HAUS5O94927 633 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 ACSL3O95573 720 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 MZF1P28698 734 aaPredicted RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 RCVRNP35243 200 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 TCF7P36402 384 aaPredicted RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 STT3AP46977 705 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 DR1Q01658 176 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 CD300CQ08708 224 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 CDC16Q13042 620 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 ZNF211Q13398 564 aaPredicted RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 KIAA1755Q5JYT7 1200 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 MTDHQ86UE4 582 aaKnown RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 TPH2Q8IWU9 490 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 KCTD17Q8N5Z5 321 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 RNF169Q8NCN4 708 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 SLC20A1Q8WUM9 679 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 SLC5A5Q92911 643 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 NACC2Q96BF6 587 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 CCDC28BQ9BUN5 200 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 LIN28AQ9H9Z2 209 aaKnown RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 PARVGQ9HBI0 331 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 TIMMDC1Q9NPL8 285 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 TRNAU1APQ9NX07 287 aaKnown RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 NKIRAS1Q9NYS0 192 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 GRHL1Q9NZI5 618 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 RPTORQ8N122 1335 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 FOXN3O00409 490 aaPredicted RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 KIAA0391O15091 583 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 FAM13AO94988 1023 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 FOXN2P32314 431 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 PTGIRP43119 386 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 MARCKSL1P49006 195 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 HADHBP55084 474 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 DLG4P78352 724 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 MAPK7Q13164 816 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 SEPT6Q14141 434 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 GPR162Q16538 588 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 NEPROQ6NW34 567 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 VSTM1Q6UX27 236 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 DAW1Q8N136 415 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 NUP93Q8N1F7 819 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 CFAP61Q8NHU2 1237 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 BHMTQ93088 406 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ERP44Q9BS26 406 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ANGPTL2Q9UKU9 493 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 PRR12Q9ULL5 1215 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 CLEC11AQ9Y240 323 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 DIS3Q9Y2L1 958 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 UBE4BO95155 1302 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 WDR91A4D1P6 747 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 IQCA1LA6NCM1 817 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 WDR46O15213 610 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 CHMP2AO43633 222 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 DCTN3O75935 186 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 MMP10P09238 476 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 CYP2J2P51589 502 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 TGFB2P61812 414 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ANKDD1AQ495B1 522 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 B3GNT9Q6UX72 402 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 SRRM1Q8IYB3 904 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 ZFP28Q8NHY6 868 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 IRGQQ8WZA9 623 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 KRT35Q92764 455 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 C18orf8Q96DM3 657 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 NSMCE3Q96MG7 304 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 FAM161BQ96MY7 647 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 MKS1Q9NXB0 559 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 NDE1Q9NXR1 346 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 DDX43Q9NXZ2 648 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 DCTN4Q9UJW0 460 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 BCS1LQ9Y276 419 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 WDR81Q562E7 1941 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ANKRD62A6NC57 917 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 E9PBE3 544 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ADCY6O43306 1168 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 CLPTM1O96005 669 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ZBED1O96006 694 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 S100BP04271 92 aaPredicted RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 BMP3P12645 472 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 KCNA2P16389 499 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 NOP14P78316 857 aaKnown RBP8.26□□□□□ -1.09
UBR1-202ENST00000546274 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 BFSP1Q12934 665 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 ITGA9Q13797 1035 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 TCEAL1Q15170 157 aa8.26□□□□□ -1.09
UBR1-202ENST00000546274 BCL2A1Q16548 175 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms