RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 SCFD1Q8WVM8 642 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 FAM3CQ92520 227 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 PI4K2AQ9BTU6 479 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 ABCB6Q9NP58 842 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 ZMYM5Q9UJ78 669 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 TCHHQ07283 1943 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 PVALEFA0A1B0GWK0 134 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 GABRDO14764 452 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 PRPF40AO75400 957 aaKnown RBP24.4■■□□□ 1.5
CHD4-214ENST00000545942 ACAT1P24752 427 aaKnown RBP24.4■■□□□ 1.5
CHD4-214ENST00000545942 PCSK1P29120 753 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 CASP1P29466 404 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 MLLT6P55198 1093 aaPredicted RBP24.4■■□□□ 1.5
CHD4-214ENST00000545942 DPH6Q7L8W6 267 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 HS2ST1Q7LGA3 356 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 NELFCDQ8IXH7 590 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 HPDLQ96IR7 371 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 RCOR1Q9UKL0 485 aa24.4■■□□□ 1.5
CHD4-214ENST00000545942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.39■■□□□ 1.5
CHD4-214ENST00000545942 HMGA1P17096 107 aaKnown RBP24.39■■□□□ 1.5
CHD4-214ENST00000545942 AFMP43652 599 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 SOWAHAQ2M3V2 549 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 OSTM1Q86WC4 334 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 CEP57L1Q8IYX8 460 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 RDH13Q8NBN7 331 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 MSANTD3Q96H12 275 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 LRRC3BQ96PB8 259 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 PKMYT1Q99640 499 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 GTF3C4Q9UKN8 822 aa24.39■■□□□ 1.5
CHD4-214ENST00000545942 CLIC2O15247 247 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 PRAMEF12O95522 483 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 CSH1P0DML2 217 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 CSH2P0DML3 217 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 GPR15P49685 360 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 CYP2J2P51589 502 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 RPL10AP62906 217 aaKnown RBP24.38■■□□□ 1.49
CHD4-214ENST00000545942 CSTF1Q05048 431 aaKnown RBP24.38■■□□□ 1.49
CHD4-214ENST00000545942 CUL4BQ13620 913 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 ARHGAP29Q52LW3 1261 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 C1orf228Q6PIY5 440 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 XXYLT1Q8NBI6 393 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 FNBP1Q96RU3 617 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 SLC46A2Q9BY10 475 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 C8orf33Q9H7E9 229 aaPredicted RBP24.38■■□□□ 1.49
CHD4-214ENST00000545942 SLC39A2Q9NP94 309 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 CGNQ9P2M7 1197 aaKnown RBP24.38■■□□□ 1.49
CHD4-214ENST00000545942 CFAP54Q96N23 3096 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 COL4A2P08572 1712 aa24.38■■□□□ 1.49
CHD4-214ENST00000545942 SLFN14P0C7P3 912 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 DLATP10515 647 aaKnown RBP24.37■■□□□ 1.49
CHD4-214ENST00000545942 TNNI1P19237 187 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 CCNE1P24864 410 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 CYP2F1P24903 491 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 KPNA1P52294 538 aaPredicted RBP24.37■■□□□ 1.49
CHD4-214ENST00000545942 NLRP12P59046 1061 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 MTAPQ13126 283 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 PSMD6Q15008 389 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 BMT2Q1RMZ1 405 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 CFAP221Q4G0U5 840 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 TRAPPC11Q7Z392 1133 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 LIMS2Q7Z4I7 341 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 TMEM150AQ86TG1 271 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 BPIFB1Q8TDL5 484 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 CHRDQ9H2X0 955 aa24.37■■□□□ 1.49
CHD4-214ENST00000545942 MAGED2Q9UNF1 606 aaPredicted RBP24.37■■□□□ 1.49
CHD4-214ENST00000545942 SLC38A8A6NNN8 435 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 HCRTO43612 131 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 F11P03951 625 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 DDX6P26196 483 aaKnown RBP eCLIP24.36■■□□□ 1.49
CHD4-214ENST00000545942 CYP24A1Q07973 514 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 DDR2Q16832 855 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 SDHAF4Q5VUM1 108 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 SPATA2LQ8IUW3 424 aaPredicted RBP24.36■■□□□ 1.49
CHD4-214ENST00000545942 C12orf56Q8IXR9 622 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 CMTM8Q8IZV2 173 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 CELF5Q8N6W0 485 aaKnown RBP24.36■■□□□ 1.49
CHD4-214ENST00000545942 FUBP3Q96I24 572 aaKnown RBP eCLIP24.36■■□□□ 1.49
CHD4-214ENST00000545942 CGRRF1Q99675 332 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 IER2Q9BTL4 223 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 LMAN1LQ9HAT1 526 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 SERTAD1Q9UHV2 236 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 CACNA1IQ9P0X4 2223 aa24.36■■□□□ 1.49
CHD4-214ENST00000545942 KINO60870 393 aaKnown RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 AVPR1AP37288 418 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 PLCB2Q00722 1185 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 CCDC142Q17RM4 750 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 KNOP1Q1ED39 458 aaKnown RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 GRAMD1CQ8IYS0 662 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 STKLD1Q8NE28 680 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 KBTBD7Q8WVZ9 684 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 CCDC127Q96BQ5 260 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 ZFYVE19Q96K21 471 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 SMG9Q9H0W8 520 aaKnown RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 PRMT8Q9NR22 394 aaPredicted RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 THG1LQ9NWX6 298 aaKnown RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 UXTQ9UBK9 157 aaPredicted RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 CDH9Q9ULB4 789 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 PCDHGA2Q9Y5H1 932 aa24.35■■□□□ 1.49
CHD4-214ENST00000545942 PTPRZ1P23471 2315 aaPredicted RBP24.35■■□□□ 1.49
CHD4-214ENST00000545942 TICRRQ7Z2Z1 1910 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms