RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 EIF3CLB5ME19 914 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 F8W810 466 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 I3L4J1 428 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 O00370 1275 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 THAP12O43422 761 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 AKR1B10O60218 316 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 CA3P07451 260 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 CD19P15391 556 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 CCZ1BP86790 482 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 CCZ1P86791 482 aaPredicted RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 ARID5AQ03989 594 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 ASTE1Q2TB18 679 aaPredicted RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 CFAP221Q4G0U5 840 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 CTXN3Q4LDR2 81 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 KIAA0319Q5VV43 1072 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 NOP9Q86U38 636 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 KLHL23Q8NBE8 558 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 STK32AQ8WU08 396 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 HEXIM2Q96MH2 286 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 NOX5Q96PH1 765 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 EIF3CQ99613 913 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 PBX4Q9BYU1 374 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 ZCWPW1Q9H0M4 648 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 ZBP1Q9H171 429 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 RXFP1Q9HBX9 757 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 PNPLA8Q9NP80 782 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 MRPL17Q9NRX2 175 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 HESX1Q9UBX0 185 aa17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRPF40A-212ENST00000545856 LCHNA4D1U4 455 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 PNMA6AP0CW24 399 aaPredicted RBP17■□□□□ 0.31
PRPF40A-212ENST00000545856 SKILP12757 684 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 TNFAIP3P21580 790 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 PBX3P40426 434 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 BCAT1P54687 386 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 KRT83P78385 493 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 TAP1Q03518 808 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 GPR17Q13304 367 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 PSMD5Q16401 504 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 LRIT3Q3SXY7 679 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 ZNF394Q53GI3 561 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 RTP2Q5QGT7 225 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 TPGS2Q68CL5 300 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 RTL10Q7L3V2 364 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 ZNF571Q7Z3V5 609 aaPredicted RBP17■□□□□ 0.31
PRPF40A-212ENST00000545856 ACOT1Q86TX2 421 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 TMEM35BQ8NCS4 154 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
PRPF40A-212ENST00000545856 SPPL2BQ8TCT7 592 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 ELMO3Q96BJ8 720 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 VCPIP1Q96JH7 1222 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 PKMYT1Q99640 499 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 VN1R3Q9BXE9 311 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 UBXN6Q9BZV1 441 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 PDCL3Q9H2J4 239 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 INTUQ9ULD6 942 aa17■□□□□ 0.31
PRPF40A-212ENST00000545856 MTCL1Q9Y4B5 1905 aaKnown RBP16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 H3BNC9 293 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 CCP110O43303 1012 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 NDUFA10O95299 355 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 CYP1A1P04798 512 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 IGFBP6P24592 240 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 LMO2P25791 158 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 EIF4A3P38919 411 aaKnown RBP16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 MAGEA11P43364 429 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 NDUFV1P49821 464 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 KIF11P52732 1056 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 RABGGTBP53611 331 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 FMO1Q01740 532 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 SPA17Q15506 151 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 VSTM1Q6UX27 236 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 ANKRD52Q8NB46 1076 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 SLC30A5Q8TAD4 765 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 TRIM11Q96F44 468 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 SMARCD1Q96GM5 515 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 SLC28A3Q9HAS3 691 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 TLR9Q9NR96 1032 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 NME7Q9Y5B8 376 aa16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 TIMM13Q9Y5L4 95 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 EPN1Q9Y6I3 576 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-212ENST00000545856 TRANK1O15050 2925 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 LPXNO60711 386 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 PDGFRBP09619 1106 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 CENPCQ03188 943 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 BST2Q10589 180 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 SMC1AQ14683 1233 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 PPP2R2DQ66LE6 453 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 CEP57Q86XR8 500 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 FBXO22Q8NEZ5 403 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 OR10T2Q8NGX3 314 aa16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-212ENST00000545856 CHP1Q99653 195 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms