RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 KANSL3Q9P2N6 904 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CNTNAP1P78357 1384 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 DPPA5A6NC42 116 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 SPDYE2BA6NHP3 402 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 WDR46O15213 610 aaKnown RBP9.2□□□□□ -0.94
TDP1-204ENST00000545686 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
TDP1-204ENST00000545686 CFHP08603 1231 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 SPDYE6P0CI01 402 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ETS1P14921 441 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CDK16Q00536 496 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ZNF252P-AS1Q0IIN9 211 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ZYXQ15942 572 aaKnown RBP9.2□□□□□ -0.94
TDP1-204ENST00000545686 PLEKHG4Q58EX7 1191 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 FKBP1CQ5VVH2 108 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 STYK1Q6J9G0 422 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 DNAJC24Q6P3W2 148 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
TDP1-204ENST00000545686 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ARHGAP24Q8N264 748 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 UBR7Q8N806 425 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.2□□□□□ -0.94
TDP1-204ENST00000545686 NAT8LQ8N9F0 302 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 SUPT20HQ8NEM7 779 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 TCP10LQ8TDR4 215 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 DCAKDQ8WVC6 231 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 NSL1Q96IY1 281 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 GJD4Q96KN9 370 aaPredicted RBP9.2□□□□□ -0.94
TDP1-204ENST00000545686 TSSK1BQ9BXA7 367 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ZNF518BQ9C0D4 1074 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 NMRK1Q9NWW6 199 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
TDP1-204ENST00000545686 ANK1P16157 1881 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SSC5DA1L4H1 1573 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SIGLEC16A6NMB1 481 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 A8MXQ7 604 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 TCP10L2B9ZVM9 353 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 ATP9AO75110 1047 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 STBD1O95210 358 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 LDHAP00338 332 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 ASNSP08243 561 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 GSTA2P09210 222 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SKIP12755 728 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 EIF2AK2P19525 551 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 PEX19P40855 299 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 RPL7AP62424 266 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 NOP14P78316 857 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 TFDP1Q14186 410 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 CCDC6Q16204 474 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 ZFYVE27Q5T4F4 411 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SLFN12LQ6IEE8 588 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SPOPLQ6IQ16 392 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 LPAR1Q92633 364 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 GPRASP2Q96D09 838 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 CGRRF1Q99675 332 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 PDCD2LQ9BRP1 358 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 YIPF3Q9GZM5 350 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 APOBEC3GQ9HC16 384 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 PXMP2Q9NR77 195 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 AGO2Q9UKV8 859 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 ASB3Q9Y575 518 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 BRWD3Q6RI45 1802 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 IQANK1A0A1B0GTG1 560 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 H0Y3Z8 333 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 KLF11O14901 512 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 GSC2O15499 205 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 MAFGO15525 162 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SPAG6O75602 509 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 FAM155BO75949 473 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 CDH5P33151 784 aaPredicted RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 ARFIP2P53365 341 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 RPS6P62753 249 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 MXRA7P84157 204 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 CBLBQ13191 982 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 TAZQ16635 292 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 ATP13A4Q4VNC1 1196 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 CCDC62Q6P9F0 684 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SAMD1Q6SPF0 538 aaPredicted RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 CAPN12Q6ZSI9 719 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 ANKMY2Q8IV38 441 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 DHX37Q8IY37 1157 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 RFWD2Q8NHY2 731 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 ZNF606Q8WXB4 792 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 CPT1BQ92523 772 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 APOPT1Q96IL0 206 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 MCEEQ96PE7 176 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 TAAR1Q96RJ0 339 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 TMEM121Q9BTD3 319 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SYNCQ9H7C4 482 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 SLC38A10Q9HBR0 1119 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 XPNPEP1Q9NQW7 623 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 STX18Q9P2W9 335 aaKnown RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 HEY2Q9UBP5 337 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 ZNF70Q9UC06 446 aaPredicted RBP9.19□□□□□ -0.94
TDP1-204ENST00000545686 ZNRF3Q9ULT6 936 aa9.19□□□□□ -0.94
TDP1-204ENST00000545686 LOC285556D6RIA3 1793 aa9.18□□□□□ -0.94
TDP1-204ENST00000545686 PTPRJQ12913 1337 aa9.18□□□□□ -0.94
TDP1-204ENST00000545686 GYG2O15488 501 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms