RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NCKAP1LP55160 1127 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 IRX4P78413 519 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 IL17AQ16552 155 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 MGAT5BQ3V5L5 792 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 SLC39A12Q504Y0 691 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 PIP4P1Q86T03 277 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 MAB21L3Q8N8X9 362 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 SYT2Q8N9I0 419 aaPredicted RBP15.94■□□□□ 0.14
RTN3-214ENST00000545432 CD101Q93033 1021 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 SEPT5Q99719 369 aaPredicted RBP15.94■□□□□ 0.14
RTN3-214ENST00000545432 DSEQ9UL01 958 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 DERAQ9Y315 318 aa15.94■□□□□ 0.14
RTN3-214ENST00000545432 TAF4O00268 1085 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 OGTO15294 1046 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 CHRM1P11229 460 aaPredicted RBP15.93■□□□□ 0.14
RTN3-214ENST00000545432 BFSP1Q12934 665 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 USP39Q53GS9 565 aaKnown RBP15.93■□□□□ 0.14
RTN3-214ENST00000545432 TXNDC8Q6A555 127 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 FBXO18Q8NFZ0 1043 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 CCDC26Q8TAB7 109 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 USP33Q8TEY7 942 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 GIPC2Q8TF65 315 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 OSCP1Q8WVF1 389 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 CNOT6LQ96LI5 555 aaKnown RBP15.93■□□□□ 0.14
RTN3-214ENST00000545432 MYRFLQ96LU7 910 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 RAB34Q9BZG1 259 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 KCND2Q9NZV8 630 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 CPSF3Q9UKF6 684 aaKnown RBP15.93■□□□□ 0.14
RTN3-214ENST00000545432 NUP205Q92621 2012 aa15.93■□□□□ 0.14
RTN3-214ENST00000545432 DENND4CQ5VZ89 1909 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 A0A0B4J269 797 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 PATE3B3GLJ2 98 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 H0YCG3 227 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 TADA3O75528 432 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 SCP2P22307 547 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 NMT1P30419 496 aaKnown RBP15.92■□□□□ 0.14
RTN3-214ENST00000545432 PRPHP41219 470 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 TOB1P50616 345 aaPredicted RBP15.92■□□□□ 0.14
RTN3-214ENST00000545432 DGKEP52429 567 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 POU5F1Q01860 360 aaKnown RBP15.92■□□□□ 0.14
RTN3-214ENST00000545432 GUCY1B3Q02153 619 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 FAM160A1Q05DH4 1040 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 ZNF77Q15935 545 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 EML3Q32P44 896 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 KRT79Q5XKE5 535 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 JADE1Q6IE81 842 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 CPA6Q8N4T0 437 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 TRMT2BQ96GJ1 504 aaKnown RBP15.92■□□□□ 0.14
RTN3-214ENST00000545432 TMEM206Q9H813 350 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 RPF1Q9H9Y2 349 aaKnown RBP15.92■□□□□ 0.14
RTN3-214ENST00000545432 GON4LQ3T8J9 2241 aa15.92■□□□□ 0.14
RTN3-214ENST00000545432 WDFY3Q8IZQ1 3526 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 DMXL2Q8TDJ6 3036 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 PP2D1A8MPX8 630 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 K7EQS6 105 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 LAD1O00515 517 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 CSH1P0DML2 217 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 CSH2P0DML3 217 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 U2AF2P26368 475 aaKnown RBP eCLIP15.91■□□□□ 0.149e-6■□□□□ 9.5
RTN3-214ENST00000545432 FOSBP53539 338 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 LMAN2Q12907 356 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 USP4Q13107 963 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 MTF1Q14872 753 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 SPDYCQ5MJ68 293 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 CC2D1AQ6P1N0 951 aaPredicted RBP15.91■□□□□ 0.14
RTN3-214ENST00000545432 THEM5Q8N1Q8 247 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 KIAA1958Q8N8K9 716 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 TSTD1Q8NFU3 115 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 LEO1Q8WVC0 666 aaPredicted RBP15.91■□□□□ 0.14
RTN3-214ENST00000545432 ZCCHC14Q8WYQ9 949 aaKnown RBP15.91■□□□□ 0.14
RTN3-214ENST00000545432 MRPS31Q92665 395 aaKnown RBP15.91■□□□□ 0.14
RTN3-214ENST00000545432 ASB7Q9H672 318 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 GCNT4Q9P109 453 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 LARSQ9P2J5 1176 aaKnown RBP15.91■□□□□ 0.14
RTN3-214ENST00000545432 LHX6Q9UPM6 363 aa15.91■□□□□ 0.14
RTN3-214ENST00000545432 AKAP13Q12802 2813 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 CYB561D2O14569 222 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 TNFRSF10BO14763 440 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 NOL4O94818 638 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 BCKDHBP21953 392 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 GBP1P32455 592 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 SEMA3BQ13214 749 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 NBR1Q14596 966 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 TAF12Q16514 161 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 GAB4Q2WGN9 574 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 ARSHQ5FYA8 562 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 PEAR1Q5VY43 1037 aaPredicted RBP15.9■□□□□ 0.14
RTN3-214ENST00000545432 CYP2U1Q7Z449 544 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 DCP1BQ8IZD4 617 aaKnown RBP15.9■□□□□ 0.14
RTN3-214ENST00000545432 DEFB124Q8NES8 71 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 ATP2A3Q93084 1043 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 PNMA5Q96PV4 448 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 TMLHEQ9NVH6 421 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 DUS2Q9NX74 493 aaKnown RBP15.9■□□□□ 0.14
RTN3-214ENST00000545432 MMP17Q9ULZ9 603 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 C2CD2Q9Y426 696 aa15.9■□□□□ 0.14
RTN3-214ENST00000545432 A0A0A0MRY4 1105 aa15.89■□□□□ 0.13
RTN3-214ENST00000545432 HYAL3O43820 417 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms