RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 LHX5Q9H2C1 402 aa14.62□□□□□ -0.07
SCARB1-209ENST00000545305 MTIF3Q9H2K0 278 aaKnown RBP14.62□□□□□ -0.07
SCARB1-209ENST00000545305 DPEP3Q9H4B8 488 aa14.62□□□□□ -0.07
SCARB1-209ENST00000545305 FAM49BQ9NUQ9 324 aa14.62□□□□□ -0.07
SCARB1-209ENST00000545305 CDH9Q9ULB4 789 aa14.62□□□□□ -0.07
SCARB1-209ENST00000545305 TIMM13Q9Y5L4 95 aaPredicted RBP14.62□□□□□ -0.07
SCARB1-209ENST00000545305 FAM170AA1A519 330 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 F8W810 466 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 SYN3O14994 580 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 GALTP07902 379 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 CFHP08603 1231 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 PTPN1P18031 435 aaKnown RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 ACAT1P24752 427 aaKnown RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 LMO2P25791 158 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 CDH5P33151 784 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 BCAR1P56945 870 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 PSMC1P62191 440 aaKnown RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 ETF1P62495 437 aaKnown RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 GPC5P78333 572 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 YWHAHQ04917 246 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 BTG3Q14201 252 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 ZNF569Q5MCW4 686 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 DNAAF5Q86Y56 855 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 PHF13Q86YI8 300 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 RHOT2Q8IXI1 618 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 RNF10Q8N5U6 811 aaKnown RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 THAP2Q9H0W7 228 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 RRAGDQ9NQL2 400 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 ADAM22Q9P0K1 906 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 TSPAN16Q9UKR8 245 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 ZMYND8Q9ULU4 1186 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-209ENST00000545305 NME7Q9Y5B8 376 aa14.61□□□□□ -0.07
SCARB1-209ENST00000545305 CCDC85CA6NKD9 419 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 HCRTO43612 131 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 MOCS3O95396 460 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ABL1P00519 1130 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 CALB1P05937 261 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 SETSIPP0DME0 302 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 LAG3P18627 525 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 NOP2P46087 812 aaKnown RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 SLC8A3P57103 927 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 TSPY1Q01534 308 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 MDH1BQ5I0G3 518 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 TMEM240Q5SV17 173 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 PPP1R26Q5T8A7 1209 aaPredicted RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 MMS22LQ6ZRQ5 1243 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 C16orf59Q7L2K0 433 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ERICH1Q86X53 443 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 MCOLN2Q8IZK6 566 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 C12orf29Q8N999 325 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 TRIM58Q8NG06 486 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 IPO4Q8TEX9 1081 aaKnown RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ZNF592Q92610 1267 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ZNF689Q96CS4 500 aaPredicted RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 VCPIP1Q96JH7 1222 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 CALR3Q96L12 384 aaKnown RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ZNF558Q96NG5 402 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ACBD6Q9BR61 282 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 C11orf70Q9BRQ4 267 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 ZBED2Q9BTP6 218 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 MED10Q9BTT4 135 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 SYNCQ9H7C4 482 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 MARCH5Q9NX47 278 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 CTTNBP2NLQ9P2B4 639 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 HCSTQ9UBK5 93 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 CNOT8Q9UFF9 292 aaKnown RBP14.6□□□□□ -0.07
SCARB1-209ENST00000545305 PAXBP1Q9Y5B6 917 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 DUSP10Q9Y6W6 482 aa14.6□□□□□ -0.07
SCARB1-209ENST00000545305 COL4A6Q14031 1691 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 BUB1O43683 1085 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 CAPN15O75808 1086 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 CCDC130P13994 396 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 ADORA2BP29275 332 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 TKTP29401 623 aaKnown RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 BCAT1P54687 386 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 SNX16P57768 344 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 BST2Q10589 180 aaKnown RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 MAPRE1Q15691 268 aaKnown RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 INTS6LQ5JSJ4 861 aaKnown RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 FAM171A1Q5VUB5 890 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 FUT10Q6P4F1 479 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 SYT10Q6XYQ8 523 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 MON1BQ7L1V2 547 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 TMCO2Q7Z6W1 182 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 KIF18AQ8NI77 898 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 HERVK_113Q902F9 699 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 ARHGEF26Q96DR7 871 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 SLC9A7Q96T83 725 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 MIS12Q9H081 205 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 CWH43Q9H720 699 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 RC3H2Q9HBD1 1191 aaKnown RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 AVENQ9NQS1 362 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-209ENST00000545305 PCDH10Q9P2E7 1040 aa14.59□□□□□ -0.07
SCARB1-209ENST00000545305 DNAI1Q9UI46 699 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms