RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 KLHL5Q96PQ7 755 aa14.77□□□□□ -0.05
TSEN54-203ENST00000545228 HSD3B7Q9H2F3 369 aa14.77□□□□□ -0.05
TSEN54-203ENST00000545228 PCDHGC5Q9Y5F6 944 aa14.77□□□□□ -0.05
TSEN54-203ENST00000545228 TIMM13Q9Y5L4 95 aaPredicted RBP14.77□□□□□ -0.05
TSEN54-203ENST00000545228 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 TPM1P09493 284 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 CCDC172P0C7W6 258 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 PON1P27169 355 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 MRE11P49959 708 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 GPR17Q13304 367 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 UVSSAQ2YD98 709 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 INTS6LQ5JSJ4 861 aaKnown RBP14.76□□□□□ -0.05
TSEN54-203ENST00000545228 SPOPLQ6IQ16 392 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 ZNF461Q8TAF7 563 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 AUTS2Q8WXX7 1259 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 FUBP3Q96I24 572 aaKnown RBP eCLIP14.76□□□□□ -0.05
TSEN54-203ENST00000545228 B3GALT6Q96L58 329 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 SYT15Q9BQS2 421 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 CRACR2AQ9BSW2 395 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 NUP58Q9BVL2 599 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 SMYD3Q9H7B4 428 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 ABCB6Q9NP58 842 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 RTN4Q9NQC3 1192 aaKnown RBP14.76□□□□□ -0.05
TSEN54-203ENST00000545228 CISHQ9NSE2 258 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 AFF4Q9UHB7 1163 aaKnown RBP14.76□□□□□ -0.05
TSEN54-203ENST00000545228 KIAA1257Q9ULG3 409 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 POLIQ9UNA4 740 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 USP15Q9Y4E8 981 aaPredicted RBP14.76□□□□□ -0.05
TSEN54-203ENST00000545228 PTPRDP23468 1912 aa14.76□□□□□ -0.05
TSEN54-203ENST00000545228 HIDE1A8MVS5 230 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 LOC730098B7Z3J9 87 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 PER2O15055 1255 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 HOXB8P17481 243 aaPredicted RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 TUFMP49411 452 aaKnown RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 CLCN4P51793 760 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 ARPP19P56211 112 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 SLC8A3P57103 927 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 ROR1Q01973 937 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 LRMPQ12912 555 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 STILQ15468 1287 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 CYP26C1Q6V0L0 522 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 SPATA2LQ8IUW3 424 aaPredicted RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 ELMOD1Q8N336 334 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 B3GALNT2Q8NCR0 500 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 LMO3Q8TAP4 145 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 KBTBD7Q8WVZ9 684 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 CLSTN3Q9BQT9 956 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 PHF7Q9BWX1 381 aaPredicted RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 LSM14BQ9BX40 385 aaKnown RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 ZCWPW1Q9H0M4 648 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 APOBEC3GQ9HC16 384 aaKnown RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 UBE2TQ9NPD8 197 aaPredicted RBP14.75□□□□□ -0.05
TSEN54-203ENST00000545228 PCDHB5Q9Y5E4 795 aa14.75□□□□□ -0.05
TSEN54-203ENST00000545228 MUC6Q6W4X9 2439 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 PRRG1O14668 218 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 TBC1D4O60343 1298 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 CLASP2O75122 1294 aaKnown RBP14.74□□□□□ -0.05
TSEN54-203ENST00000545228 CILPO75339 1184 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 PAEPP09466 180 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 WEE2P0C1S8 567 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 ATF2P15336 505 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 CD58P19256 250 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 SLC9A1P19634 815 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 BPIFB4P59827 614 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 PLCB2Q00722 1185 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 TRIM14Q14142 442 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 CBX2Q14781 532 aaPredicted RBP14.74□□□□□ -0.05
TSEN54-203ENST00000545228 SYCP1Q15431 976 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 TRIM67Q6ZTA4 783 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 BMP8AQ7Z5Y6 402 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 GLYCTKQ8IVS8 523 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 CEP295NLQ96MC4 621 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 SPAG5Q96R06 1193 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 MRPL45Q9BRJ2 306 aaKnown RBP14.74□□□□□ -0.05
TSEN54-203ENST00000545228 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 SFXN1Q9H9B4 322 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 ZDHHC7Q9NXF8 308 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 EHD2Q9NZN4 543 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 HCFC2Q9Y5Z7 792 aa14.74□□□□□ -0.05
TSEN54-203ENST00000545228 TMEM221A6NGB7 291 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 M0R296 226 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 MED7O43513 233 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 TGM5O43548 720 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 ABLIM3O94929 683 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 LRG1P02750 347 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 HNRNPA1P09651 372 aaKnown RBP eCLIP14.73□□□□□ -0.05
TSEN54-203ENST00000545228 KRT5P13647 590 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 UCHL3P15374 230 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 HOXA9P31269 272 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 RAP1GAPP47736 663 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 NDST1P52848 882 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 RPL10AP62906 217 aaKnown RBP14.73□□□□□ -0.05
TSEN54-203ENST00000545228 ZXDAP98168 799 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 RBM10P98175 930 aaKnown RBP14.73□□□□□ -0.05
TSEN54-203ENST00000545228 VEPH1Q14D04 833 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 CFAP221Q4G0U5 840 aa14.73□□□□□ -0.05
TSEN54-203ENST00000545228 SLC39A12Q504Y0 691 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms