RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 VEPH1Q14D04 833 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 PDGFRLQ15198 375 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 ARMCX6Q7L4S7 300 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 C11orf74Q86VG3 221 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 LRRTM3Q86VH5 581 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 OLIG1Q8TAK6 271 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 USP33Q8TEY7 942 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 RLN3Q8WXF3 142 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 WASF1Q92558 559 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 CNOT6LQ96LI5 555 aaKnown RBP10.19□□□□□ -0.78
CHD4-212ENST00000545083 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 ZCWPW1Q9H0M4 648 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 KIF9Q9HAQ2 790 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 MBD1Q9UIS9 605 aaPredicted RBP10.19□□□□□ -0.78
CHD4-212ENST00000545083 UBQLN1Q9UMX0 589 aaKnown RBP10.19□□□□□ -0.78
CHD4-212ENST00000545083 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 WNT6Q9Y6F9 365 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 MYO16Q9Y6X6 1858 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 KIAA1549LQ6ZVL6 1849 aa10.19□□□□□ -0.78
CHD4-212ENST00000545083 BPTFQ12830 3046 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 ATXN2Q99700 1313 aaKnown RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 E9PMD0 336 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 K7EQS6 105 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 TADA3O75528 432 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 REC8O95072 547 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 OR52Z1P0C646 297 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 HAPLN1P10915 354 aaPredicted RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 ODC1P11926 461 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 MUTP22033 750 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 SEC13P55735 322 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 SCAPQ12770 1279 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 LMAN2Q12907 356 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 ZNF268Q14587 947 aaPredicted RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 MTF1Q14872 753 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 ZNF174Q15697 407 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 TAF12Q16514 161 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 EML3Q32P44 896 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 C2orf27AQ580R0 203 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 CC2D1AQ6P1N0 951 aaPredicted RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 RAB44Q7Z6P3 723 aaPredicted RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 MON1AQ86VX9 555 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 TMEFF1Q8IYR6 380 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 CPA6Q8N4T0 437 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 CCDC33Q8N5R6 958 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 SLC22A12Q96S37 553 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 PLEKHA5Q9HAU0 1116 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 DUS2Q9NX74 493 aaKnown RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 ZMYM5Q9UJ78 669 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 RBM19Q9Y4C8 960 aaKnown RBP10.18□□□□□ -0.78
CHD4-212ENST00000545083 TSC2P49815 1807 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 PI4KAP42356 2102 aa10.18□□□□□ -0.78
CHD4-212ENST00000545083 UPK3BL1B0FP48 263 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 UPK3BL2E5RIL1 263 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 TNFRSF10BO14763 440 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 CYP11A1P05108 521 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 CLTAP09496 248 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
CHD4-212ENST00000545083 DDX6P26196 483 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHD4-212ENST00000545083 OPRD1P41143 372 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 P2RY2P41231 377 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 USP4Q13107 963 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 ZNF77Q15935 545 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 ENOX2Q16206 610 aaKnown RBP10.17□□□□□ -0.78
CHD4-212ENST00000545083 SDHAF4Q5VUM1 108 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 HAUS3Q68CZ6 603 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 KCNK18Q7Z418 384 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 TTC30AQ86WT1 665 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 SYT12Q8IV01 421 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 SFTPA1Q8IWL2 248 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 TMEM161BQ8NDZ6 487 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 TTC16Q8NEE8 873 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 OR2I1PQ8NGU4 316 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 OSCP1Q8WVF1 389 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 CYP2S1Q96SQ9 504 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 NUSAP1Q9BXS6 441 aaKnown RBP10.17□□□□□ -0.78
CHD4-212ENST00000545083 ABI2Q9NYB9 513 aaPredicted RBP10.17□□□□□ -0.78
CHD4-212ENST00000545083 MMP17Q9ULZ9 603 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 PTPRDP23468 1912 aa10.17□□□□□ -0.78
CHD4-212ENST00000545083 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 H0Y626 953 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 CLDN3O15551 220 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 FAM189A1O60320 539 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 JAK2O60674 1132 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 TRIM16O95361 564 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 SEC24BO95487 1268 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 ADRB2P07550 413 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 MAPTP10636 758 aaKnown RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 ITPKAP23677 461 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 IFNAR2P48551 515 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 FAM160A1Q05DH4 1040 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 PPP2R3AQ06190 1150 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 MESP2Q0VG99 397 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 STRN3Q13033 797 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 CRY1Q16526 586 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 GAB4Q2WGN9 574 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 ZC2HC1CQ53FD0 456 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms