RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 POU2F2P09086 479 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNHG1-221ENST00000544983 CD58P19256 250 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ACO1P21399 889 aaKnown RBP12.51□□□□□ -0.41
SNHG1-221ENST00000544983 MAGEA11P43364 429 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ARPP19P56211 112 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 BPIFB4P59827 614 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ADCY1Q08828 1119 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 PLD1Q13393 1074 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 STILQ15468 1287 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 SLC39A12Q504Y0 691 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 FIGNQ5HY92 759 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 DPY19L2P1Q6NXN4 242 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 VSTM1Q6UX27 236 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 UBR7Q8N806 425 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 KREMEN2Q8NCW0 462 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 CMASQ8NFW8 434 aaPredicted RBP12.51□□□□□ -0.41
SNHG1-221ENST00000544983 SHC3Q92529 594 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ARID3AQ99856 593 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ZDHHC7Q9NXF8 308 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 DNAJC12Q9UKB3 198 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 MYO6Q9UM54 1294 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 COG5Q9UP83 839 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 PCDHB4Q9Y5E5 795 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 BRWD1Q9NSI6 2320 aa12.51□□□□□ -0.41
SNHG1-221ENST00000544983 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 MTCL1Q9Y4B5 1905 aaKnown RBP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 UNC80Q8N2C7 3258 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 MTMR11A4FU01 709 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 PRRG1O14668 218 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 TEX33O43247 280 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 CCDC172P0C7W6 258 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 ACAT1P24752 427 aaKnown RBP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 ZNF132P52740 706 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 RAD23BP54727 409 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 RPL10AP62906 217 aaKnown RBP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 MEA1Q16626 185 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 TMEM270Q6UE05 265 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 RNF19BQ6ZMZ0 732 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 LRRTM3Q86VH5 581 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 GAS2L3Q86XJ1 694 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 SPATA2LQ8IUW3 424 aaPredicted RBP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 GLYCTKQ8IVS8 523 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 HEXIM2Q96MH2 286 aaKnown RBP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 NAA15Q9BXJ9 866 aaKnown RBP12.5□□□□□ -0.41
SNHG1-221ENST00000544983 GANQ9H2C0 597 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 IGFLR1Q9H665 355 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 SFXN1Q9H9B4 322 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 MAN1C1Q9NR34 630 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 IFNKQ9P0W0 207 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 CEP72Q9P209 647 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 GTF3C4Q9UKN8 822 aa12.5□□□□□ -0.41
SNHG1-221ENST00000544983 ITIH6Q6UXX5 1313 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 MYBPHLA2RUH7 354 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 XYLBO75191 536 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 ZMYND10O75800 440 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 NOL4O94818 638 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 VDRP11473 427 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 COL9A1P20849 921 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 PBX1P40424 430 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 ALDH1A3P47895 512 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 SLC8A3P57103 927 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 ITIH3Q06033 890 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 DUSP4Q13115 394 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 DRAP1Q14919 205 aaPredicted RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 SGO2Q562F6 1265 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 ARHGAP17Q68EM7 881 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 FAM71AQ8IYT1 594 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 SLC4A11Q8NBS3 891 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 RBBP8NLQ8NC74 664 aaPredicted RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 MAFAQ8NHW3 353 aaPredicted RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 SPAG5Q96R06 1193 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 TMEM209Q96SK2 561 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 TRIM5Q9C035 493 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 XPO4Q9C0E2 1151 aaKnown RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
SNHG1-221ENST00000544983 CYP4F11Q9HBI6 524 aa12.49□□□□□ -0.41
SNHG1-221ENST00000544983 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms