RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 NDST1P52848 882 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 HSP90B2PQ58FF3 399 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 TAF3Q5VWG9 929 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 C7orf61Q8IZ16 206 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 RPUSD2Q8IZ73 545 aaKnown RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 TOP1MTQ969P6 601 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 ZNF560Q96MR9 790 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PKMYT1Q99640 499 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 VN1R3Q9BXE9 311 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 DPEP3Q9H4B8 488 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 CWH43Q9H720 699 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 CYTH4Q9UIA0 394 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 BARX2Q9UMQ3 279 aaPredicted RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PCDHB4Q9Y5E5 795 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 DUSP10Q9Y6W6 482 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 KIAA1671Q9BY89 1806 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 O00370 1275 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 CYP11A1P05108 521 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PFKMP08237 780 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PAEPP09466 180 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 RHOXF2BP0C7M4 288 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 WARSP23381 471 aaKnown RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PBX3P40426 434 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 USP8P40818 1118 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 BRCC3P46736 316 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 SLC11A1P49279 550 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 TNNC1P63316 161 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 MYO1EQ12965 1108 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PTP4A2Q12974 167 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 IKBKEQ14164 716 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 CLUL1Q15846 466 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 SV2CQ496J9 727 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PAN2Q504Q3 1202 aaKnown RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PKDCCQ504Y2 493 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 ZNF394Q53GI3 561 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM240Q5SV17 173 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 RASIP1Q5U651 963 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 WSCD1Q658N2 575 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 CREG2Q8IUH2 290 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 RNF168Q8IYW5 571 aaPredicted RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 SYCE1Q8N0S2 351 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 WDTC1Q8N5D0 677 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 ZNF606Q8WXB4 792 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 DDX27Q96GQ7 796 aaKnown RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 SENP8Q96LD8 212 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 OSBPL9Q96SU4 736 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 MMS19Q96T76 1030 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 RHOXF2Q9BQY4 288 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 ISCUQ9H1K1 167 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 STXBP5LQ9Y2K9 1186 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 PCDHGC5Q9Y5F6 944 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 TRANK1O15050 2925 aa7.44□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM170AA1A519 330 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 GABBR2O75899 941 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 SYN1P17600 705 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 TKTP29401 623 aaKnown RBP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 GNA15P30679 374 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 CDH5P33151 784 aaPredicted RBP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 NOMO3P69849 1222 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 CLEC16AQ2KHT3 1053 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 ALKBH5Q6P6C2 394 aaKnown RBP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 PAQR9Q6ZVX9 377 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 ZNF365Q70YC5 407 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 ADGRF2Q8IZF7 708 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 CRYBG2Q8N1P7 616 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM199Q8N511 208 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 C12orf29Q8N999 325 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 EIF1ADQ8N9N8 165 aaKnown RBP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 HASPINQ8TF76 798 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 RSPH1Q8WYR4 309 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 ARHGEF26Q96DR7 871 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM176AQ96HP8 235 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 PBKQ96KB5 322 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 SUSD3Q96L08 255 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 UROC1Q96N76 676 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 SELENOOQ9BVL4 669 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 ABCB6Q9NP58 842 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM30AQ9NV96 361 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 PSD3Q9NYI0 1048 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 PCDHGC3Q9UN70 934 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 PCDHB7Q9Y5E2 793 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 NLRC5Q86WI3 1866 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 NCANO14594 1321 aa7.43□□□□□ -1.22
HMGCS2-204ENST00000544913 TCRBV5S1A1TA0A578 114 aa7.42□□□□□ -1.22
HMGCS2-204ENST00000544913 TBKBP1A7MCY6 615 aa7.42□□□□□ -1.22
HMGCS2-204ENST00000544913 CYB561D2O14569 222 aa7.42□□□□□ -1.22
HMGCS2-204ENST00000544913 NRP1O14786 923 aa7.42□□□□□ -1.22
HMGCS2-204ENST00000544913 ATP2C2O75185 946 aa7.42□□□□□ -1.22
HMGCS2-204ENST00000544913 B3GAT3O94766 335 aa7.42□□□□□ -1.22
HMGCS2-204ENST00000544913 BAIAP3O94812 1187 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms