RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 KAT5Q92993 513 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 ALKBH8Q96BT7 664 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 SLC10A4Q96EP9 437 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 IKZF4Q9H2S9 585 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 STXBP5LQ9Y2K9 1186 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 HNRNPCL1O60812 293 aaKnown RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 GH1P01241 217 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 GSTA1P08263 222 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 SPIRE1Q08AE8 756 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 TTC39BQ5VTQ0 682 aaPredicted RBP6.07□□□□□ -1.44
VPS50-220ENST00000544910 NXNQ6DKJ4 435 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 RAPH1Q70E73 1250 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 RSPH3Q86UC2 560 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 KATNAL2Q8IYT4 538 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 STAMBPL1Q96FJ0 436 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 MFSD14AQ96MC6 490 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 ETNK1Q9HBU6 452 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 STRCQ7RTU9 1775 aa6.07□□□□□ -1.44
VPS50-220ENST00000544910 XIRP1Q702N8 1843 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 KLRG2A4D1S0 409 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 O00370 1275 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 SPAG6O75602 509 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ZNF189O75820 626 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 TTC4O95801 387 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ITGB3P05106 788 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 LCP1P13796 627 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ITGB5P18084 799 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 SULT1E1P49888 294 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PTK7Q13308 1070 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 TRADDQ15628 312 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 UBXN6Q9BZV1 441 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 NINJ2Q9NZG7 142 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 EPS15L1Q9UBC2 864 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PAIP2BQ9ULR5 123 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 ARHGAP10A1A4S6 786 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 YDJCA8MPS7 323 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 A8MXQ7 604 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 MAGEB2O15479 319 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CST8O60676 142 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 NUDT17P0C025 328 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ZNF200P98182 395 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 LAMTOR4Q0VGL1 99 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 LVRNQ6Q4G3 990 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DNAAF3Q8N9W5 541 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 LENG9Q96B70 501 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 FGD4Q96M96 766 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DHX35Q9H5Z1 703 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 XAB2Q9HCS7 855 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 ERAP1Q9NZ08 941 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DCTN4Q9UJW0 460 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 COG5Q9UP83 839 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ZMYM2Q9UBW7 1377 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CFAP69A5D8W1 941 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 GYG2O15488 501 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 HUS1O60921 280 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 FSBPO95073 299 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 KRT10P13645 584 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PDGFRAP16234 1089 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 SAT1P21673 171 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 NOVP48745 357 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ALDH5A1P51649 535 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 CYB5D1Q6P9G0 228 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 YTHDF3Q7Z739 585 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 CNPY4Q8N129 248 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 FAM71DQ8N9W8 422 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 UBA3Q8TBC4 463 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 ASAP3Q8TDY4 903 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 ATXN2LQ8WWM7 1075 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 ZNF560Q96MR9 790 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 TMEM134Q9H6X4 195 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 LRRC19Q9H756 370 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PAK5Q9P286 719 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 AJAP1Q9UKB5 411 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 H3BRJ5 948 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PPP1R12AO14974 1030 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 MARCKSL1P49006 195 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 MYL6P60660 151 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 AP1B1Q10567 949 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 GEN1Q17RS7 908 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 C10orf71Q711Q0 1435 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 AGGF1Q8N302 714 aaeCLIP6.06□□□□□ -1.44
VPS50-220ENST00000544910 SHC3Q92529 594 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 TSSK1BQ9BXA7 367 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PORCNQ9H237 461 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 FAM96AQ9H5X1 160 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 NPHS2Q9NP85 383 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CISHQ9NSE2 258 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 GGA2Q9UJY4 613 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 MYH8P13535 1937 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 TTC36A6NLP5 189 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 KITP10721 976 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 FLT3P36888 993 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 RGS7P49802 495 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DRG2P55039 364 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 IFI35P80217 286 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 ASPHQ12797 758 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DGKZQ13574 1117 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CUL3Q13618 768 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CRYMQ14894 314 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms