RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ATP11CQ8NB49 1132 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 GTF3C2Q8WUA4 911 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ELAC2Q9BQ52 826 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 PSMC3IPQ9P2W1 217 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 COL1A2P08123 1366 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 TCP11X1B4DZS4 312 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 F8VP50 259 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 APOC4-APOC2K7ER74 178 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ATP5HO75947 161 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 CALCAP01258 141 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 APOC2P02655 101 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 STIP1P31948 543 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 TNFSF9P41273 254 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 PHKA2P46019 1235 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 MNAT1P51948 309 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ARL4CP56559 192 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 GPS1Q13098 491 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 TRIP13Q15645 432 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 HIF1AQ16665 826 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 WDR72Q3MJ13 1102 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 EFHC2Q5JST6 749 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ZNF484Q5JVG2 852 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 LLGL2Q6P1M3 1020 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 WDTC1Q8N5D0 677 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 SHCBP1Q8NEM2 672 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 CMASQ8NFW8 434 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 UHMK1Q8TAS1 419 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 USP6NLQ92738 828 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 TGS1Q96RS0 853 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 MROH8Q9H579 483 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 KLHL14Q9P2G3 628 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 FAM170AA1A519 330 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 LRCH4O75427 683 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 TOMM70O94826 608 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 ASMTLO95671 621 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 PSMA2P25787 234 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
PAAF1-215ENST00000544909 IFNAR2P48551 515 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 TFAMQ00059 246 aaKnown RBP13.1□□□□□ -0.31
PAAF1-215ENST00000544909 OGDHQ02218 1023 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 INCA1Q0VD86 236 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 PTPN20Q4JDL3 420 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 TREML2Q5T2D2 321 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 NCAPG2Q86XI2 1143 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 ERO1BQ86YB8 467 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 ZNF398Q8TD17 642 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 DENND1AQ8TEH3 1009 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 APBB2Q92870 758 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 MCRS1Q96EZ8 462 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 SMC6Q96SB8 1091 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 SAYSD1Q9NPB0 183 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 FGFR1OP2Q9NVK5 253 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.1□□□□□ -0.31
PAAF1-215ENST00000544909 AGTPBP1Q9UPW5 1226 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 C2CD2Q9Y426 696 aa13.1□□□□□ -0.31
PAAF1-215ENST00000544909 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ASB14A6NK59 587 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 CILPO75339 1184 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 FAM155BO75949 473 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 RNF8O76064 485 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ZWINTO95229 277 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 VPS41P49754 854 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 PTPN11Q06124 597 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 FSTL1Q12841 308 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 BNIP1Q12981 228 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 CCDC38Q502W7 563 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ZFYVE27Q5T4F4 411 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 C4orf22Q6V702 233 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 SRRM1Q8IYB3 904 aaKnown RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 CCDC63Q8NA47 563 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 TFAP2BQ92481 460 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 C9orf72Q96LT7 481 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 DHRS4Q9BTZ2 278 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 FHDC1Q9C0D6 1143 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-215ENST00000544909 CDT1Q9H211 546 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 YY1AP1Q9H869 796 aa13.09□□□□□ -0.31
PAAF1-215ENST00000544909 ASNSD1Q9NWL6 643 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms