RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TAF6P49848 677 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 WDR44Q5JSH3 913 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 CRELD2Q6UXH1 353 aaPredicted RBP17.49■□□□□ 0.39
DDX55-212ENST00000544738 STXBP4Q6ZWJ1 553 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 METTL23Q86XA0 190 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 GAB3Q8WWW8 586 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 TNMDQ9H2S6 317 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 SLITRK6Q9H5Y7 841 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 C8orf33Q9H7E9 229 aaPredicted RBP17.49■□□□□ 0.39
DDX55-212ENST00000544738 ASAH2Q9NR71 780 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 CEP72Q9P209 647 aa17.49■□□□□ 0.39
DDX55-212ENST00000544738 SRRM3A6NNA2 597 aaPredicted RBP17.48■□□□□ 0.39
DDX55-212ENST00000544738 TOP3BO95985 862 aaKnown RBP17.48■□□□□ 0.39
DDX55-212ENST00000544738 HOXA6P31267 233 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 RAP1GAPP47736 663 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 ALDH1A3P47895 512 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 EPHB3P54753 998 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 EPHA5P54756 1037 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
DDX55-212ENST00000544738 AMPD3Q01432 767 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 RING1Q06587 406 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 KCNA1Q09470 495 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 TCEAL6Q6IPX3 200 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 TXNDC11Q6PKC3 985 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 TCEAL3Q969E4 200 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 FAM213AQ9BRX8 229 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 GPR88Q9GZN0 384 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 IKZF4Q9H2S9 585 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 HSFX1Q9UBD0 423 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 LHX6Q9UPM6 363 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 YIPF1Q9Y548 306 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 AKAP13Q12802 2813 aa17.48■□□□□ 0.39
DDX55-212ENST00000544738 TICRRQ7Z2Z1 1910 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 C4orf47A7E2U8 309 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 SPECC1L-ADORA2AF8WAN1 911 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 ARNTLO00327 626 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 KIAA0391O15091 583 aaKnown RBP17.47■□□□□ 0.39
DDX55-212ENST00000544738 EXTL3O43909 919 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 CUTAO60888 179 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 MOSPD3O75425 235 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 OR4Q2P0C623 313 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 MPLP40238 635 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 PNPLA4P41247 253 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 CASP5P51878 434 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 ZNF252P-AS1Q0IIN9 211 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 SMARCB1Q12824 385 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 DUSP4Q13115 394 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 PON2Q15165 354 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 TEAD2Q15562 447 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 PLA2G2CQ5R387 149 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 CENPPQ6IPU0 288 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 THEM5Q8N1Q8 247 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 IQUBQ8NA54 791 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 CACTINQ8WUQ7 758 aaKnown RBP17.47■□□□□ 0.39
DDX55-212ENST00000544738 COL26A1Q96A83 441 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 ZNF560Q96MR9 790 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
DDX55-212ENST00000544738 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 VPS45Q9NRW7 570 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 ASB3Q9Y575 518 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 SETXQ7Z333 2677 aaKnown RBP17.47■□□□□ 0.39
DDX55-212ENST00000544738 GREB1Q4ZG55 1949 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 NCANO14594 1321 aa17.47■□□□□ 0.39
DDX55-212ENST00000544738 WDFY3Q8IZQ1 3526 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 MTMR11A4FU01 709 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 KPNA7A9QM74 516 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 CYB561D2O14569 222 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 VNN2O95498 520 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 SV2CQ496J9 727 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 ATL3Q6DD88 541 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 BRSK2Q8IWQ3 736 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 RSPRY1Q96DX4 576 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 SAAL1Q96ER3 474 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 TRPV4Q9HBA0 871 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 PCDHGA5Q9Y5G8 931 aa17.46■□□□□ 0.39
DDX55-212ENST00000544738 MYBPHLA2RUH7 354 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 TMEM8BA6NDV4 472 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 CHADO15335 359 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 ZSCAN22P10073 491 aaPredicted RBP17.45■□□□□ 0.38
DDX55-212ENST00000544738 CTHP32929 405 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 TUFMP49411 452 aaKnown RBP17.45■□□□□ 0.38
DDX55-212ENST00000544738 TFAMQ00059 246 aaKnown RBP17.45■□□□□ 0.38
DDX55-212ENST00000544738 E2F4Q16254 413 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 SH3PXD2AQ5TCZ1 1133 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 RALGPS2Q86X27 583 aaPredicted RBP17.45■□□□□ 0.38
DDX55-212ENST00000544738 EFCAB13Q8IY85 973 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 ATAD1Q8NBU5 361 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 C2orf15Q8WU43 125 aaKnown RBP17.45■□□□□ 0.38
DDX55-212ENST00000544738 E2F7Q96AV8 911 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 EDEM2Q9BV94 578 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
DDX55-212ENST00000544738 ANK1P16157 1881 aa17.45■□□□□ 0.38
DDX55-212ENST00000544738 SPAG17Q6Q759 2223 aa17.44■□□□□ 0.38
DDX55-212ENST00000544738 TULP1O00294 542 aaPredicted RBP17.44■□□□□ 0.38
DDX55-212ENST00000544738 PRPF6O94906 941 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms