RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
SNRNP70-203ENST00000544278 DOCK1Q14185 1865 aa16.64■□□□□ 0.25
SNRNP70-203ENST00000544278 M0QYV0 167 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 ERBB2P04626 1255 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 CLDN10P78369 228 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 SATB1Q01826 763 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 KIF2BQ8N4N8 673 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 TMEM35BQ8NCS4 154 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 HEXIM2Q96MH2 286 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 TRIM56Q9BRZ2 755 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 XYLT2Q9H1B5 865 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 PARP2Q9UGN5 583 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 CPSF3Q9UKF6 684 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 TRIM33Q9UPN9 1127 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 MRPL42Q9Y6G3 142 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 LOXHD1Q8IVV2 1947 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 IGKV6D-21A0A0A0MT36 114 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 ZC3H11AO75152 810 aaKnown RBP eCLIP16.63■□□□□ 0.254e-8■□□□□ 11
SNRNP70-203ENST00000544278 KRT3P12035 628 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 ICAM3P32942 547 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 KIZQ2M2Z5 673 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 GPC2Q8N158 579 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 NEU2Q9Y3R4 380 aa16.63■□□□□ 0.25
SNRNP70-203ENST00000544278 CCDC189A1A4V9 331 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 STAG3L1P0CL83 205 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 MAGEA4P43358 317 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 RABGGTBP53611 331 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 OTUD4Q01804 1114 aaKnown RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PTK6Q13882 451 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 ZNF317Q96PQ6 595 aaPredicted RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 ELOVL4Q9GZR5 314 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 RPF1Q9H9Y2 349 aaKnown RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 CACNG4Q9UBN1 327 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 ARID2Q68CP9 1835 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 H0YCG3 227 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 ABLIM1O14639 778 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 TNNC2P02585 160 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PDIA2Q13087 525 aaKnown RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PRAMEF19Q5SWL8 479 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 MAP1SQ66K74 1059 aaPredicted RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PHF13Q86YI8 300 aaPredicted RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 NLRP7Q8WX94 980 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 CDCA5Q96FF9 252 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PGM2Q96G03 612 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 LBHD1Q9BQE6 289 aaPredicted RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 A0A1W2PPM1 405 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 RASA4BC9J798 803 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 RASA4O43374 803 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 LIASO43766 372 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 STAM2O75886 525 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 ITIH2P19823 946 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 TBXAS1P24557 533 aaPredicted RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 MSS51Q4VC12 460 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 ZNF667Q5HYK9 610 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 C1orf228Q6PIY5 440 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 FAM71DQ8N9W8 422 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 TRAIPQ9BWF2 469 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 B3GNT5Q9BYG0 378 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 MIS12Q9H081 205 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 SLCO1B3Q9NPD5 702 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PNMA3Q9UL41 463 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PARP14Q460N5 1801 aa16.62■□□□□ 0.25
SNRNP70-203ENST00000544278 PAPPA2Q9BXP8 1791 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 EXOC1LA0A1B0GW35 172 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 AVILO75366 819 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 KRT15P19012 456 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 ELF1P32519 619 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 SLC1A1P43005 524 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 ATXN1P54253 815 aaKnown RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 C12orf50Q8NA57 414 aaPredicted RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 RNF217Q8TC41 542 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 IP6K2Q9UHH9 426 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 MKI67P46013 3256 aaKnown RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 LRCH4O75427 683 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 PEX19P40855 299 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 RFC5P40937 340 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 PHKA2P46019 1235 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 TCEAL1Q15170 157 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 BBS9Q3SYG4 887 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 FAM102AQ5T9C2 384 aaPredicted RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 IER5Q5VY09 327 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 C6orf89Q6UWU4 347 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 FAM43BQ6ZT52 329 aaPredicted RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 TBC1D1Q86TI0 1168 aaPredicted RBP16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 RFX6Q8HWS3 928 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 UNC45BQ8IWX7 931 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 TMEM174Q8WUU8 243 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 ANKRD36BP1Q96IX9 119 aa16.61■□□□□ 0.25
SNRNP70-203ENST00000544278 PIH1D1Q9NWS0 290 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms