RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PAOXQ6QHF9 649 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ACAP3Q96P50 834 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 MECRQ9BV79 373 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 INIPQ9NRY2 104 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 GINM1Q9NU53 330 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 APPL1Q9UKG1 709 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 UBR2Q8IWV8 1755 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 COL4A1P02462 1669 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 PRR5-ARHGAP8B1AHC4 643 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 DNAJC6O75061 913 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 AKR1B1P15121 316 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 CYP11B1P15538 503 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 ARHGAP8P85298 464 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 PDE1BQ01064 536 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 CENPCQ03188 943 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
SMG8-202ENST00000543872 BBS9Q3SYG4 887 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 NADK2Q4G0N4 442 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 ARPINQ7Z6K5 226 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 ZNF554Q86TJ5 538 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 PALM2Q8IXS6 379 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 NUP98P52948 1817 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 RREB1Q92766 1687 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 DCCP43146 1447 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 TRIM43BA6NCK2 446 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 TRPA1O75762 1119 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
SMG8-202ENST00000543872 TAS2R40P59535 323 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 GPX6P59796 221 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 FOLH1Q04609 750 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 HIC1Q14526 733 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 CCDC80Q76M96 950 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 ZNF720Q7Z2F6 126 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
SMG8-202ENST00000543872 USP29Q9HBJ7 922 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 OLFML3Q9NRN5 406 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 SLC24A2Q9UI40 661 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 TAF1P21675 1872 aa13.28□□□□□ -0.28
SMG8-202ENST00000543872 TRPM3Q9HCF6 1732 aaPredicted RBP13.27□□□□□ -0.28
SMG8-202ENST00000543872 CAPN8A6NHC0 703 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 F5H6K3 240 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 SGK1O00141 431 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ZBTB5O15062 677 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 DKC1O60832 514 aaKnown RBP eCLIP13.27□□□□□ -0.28
SMG8-202ENST00000543872 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.28
SMG8-202ENST00000543872 KLRC2P26717 231 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 TMPRSS15P98073 1019 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ZNF200P98182 395 aaPredicted RBP13.27□□□□□ -0.28
SMG8-202ENST00000543872 ZNF543Q08ER8 600 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ALCAMQ13740 583 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 USH1GQ495M9 461 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 SYCP2LQ5T4T6 812 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 RNF111Q6ZNA4 994 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 SLC15A3Q8IY34 581 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 NAP1L4Q99733 375 aaKnown RBP13.27□□□□□ -0.28
SMG8-202ENST00000543872 TAGLN3Q9UI15 199 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ZNF180Q9UJW8 692 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 IKBKGQ9Y6K9 419 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 MYH11P35749 1972 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 FAM86B1E9PN63 330 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 VARSP26640 1264 aaKnown RBP13.27□□□□□ -0.28
SMG8-202ENST00000543872 MLH1P40692 756 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 MXI1P50539 228 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 SH3D19Q5HYK7 790 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 RALGPS1Q5JS13 557 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 NLRX1Q86UT6 975 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 RHPN2Q8IUC4 686 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ICA1LQ8NDH6 482 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 ARPC5LQ9BPX5 153 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 TBC1D30Q9Y2I9 924 aa13.27□□□□□ -0.28
SMG8-202ENST00000543872 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.28
SMG8-202ENST00000543872 I3L4J1 428 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 ALOX15BO15296 676 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 ATP9BO43861 1147 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 FKBP6O75344 327 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 PCSK6P29122 969 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 SLC1A1P43005 524 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 RPL5P46777 297 aaKnown RBP13.27□□□□□ -0.29
SMG8-202ENST00000543872 AQP5P55064 265 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 OXCT1P55809 520 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
SMG8-202ENST00000543872 TCEAL1Q15170 157 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 EFHC1Q5JVL4 640 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 FBXL19Q6PCT2 694 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 SAPCD2Q86UD0 394 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 RELL1Q8IUW5 271 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 BANPQ8N9N5 519 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 LZICQ8WZA0 190 aa13.27□□□□□ -0.29
SMG8-202ENST00000543872 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms