RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 IKBKEQ14164 716 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MBTPS1Q14703 1052 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CFAP161Q6P656 301 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CNKSR3Q6P9H4 555 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 ZNF365Q70YC5 407 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 DYMQ7RTS9 669 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MAATS1Q7Z4T9 603 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SRGAP1Q7Z6B7 1085 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 ZBTB8OSQ8IWT0 167 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MYCT1Q8N699 235 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 DBF4BQ8NFT6 615 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 NELL1Q92832 810 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 CCDC34Q96HJ3 373 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 NELL2Q99435 816 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 GDF15Q99988 308 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 REEP2Q9BRK0 252 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 IFIH1Q9BYX4 1025 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 ADAM19Q9H013 955 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 C2orf40Q9H1Z8 148 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MTIF3Q9H2K0 278 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 TNMDQ9H2S6 317 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 GOLPH3LQ9H4A5 285 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 C17orf75Q9HAS0 396 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 ANLNQ9NQW6 1124 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 MKL2Q9ULH7 1088 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 ODF2LQ9ULJ1 636 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 SOX13Q9UN79 622 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 HPSEQ9Y251 543 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 LUC7L2Q9Y383 392 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 NOC2LQ9Y3T9 749 aaKnown RBP5.57□□□□□ -1.52
CLIP1-217ENST00000543205 DGKBQ9Y6T7 804 aa5.57□□□□□ -1.52
CLIP1-217ENST00000543205 TRIP12Q14669 1992 aaPredicted RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 WDR81Q562E7 1941 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 FAM237AA0A1B0GTK4 181 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 MYMKA6NI61 221 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 UPK3BL1B0FP48 263 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 UPK3BL2E5RIL1 263 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 INO80B-WBP1J3KQ70 363 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 CSDE1O75534 798 aaKnown RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 ERLIN2O94905 339 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 ZNF202O95125 648 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 PLS3P13797 630 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 IDEP14735 1019 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 TFE3P19532 575 aaPredicted RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 EPHA1P21709 976 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 BMP8BP34820 402 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 NAMPTP43490 491 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 AFMP43652 599 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 LIG3P49916 1009 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 EPHB4P54760 987 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 PEX3P56589 373 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 PTENP60484 403 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 UBE2HP62256 183 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 NCBP1Q09161 790 aaKnown RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 GPNMBQ14956 572 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 TMEM240Q5SV17 173 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 TXNDC11Q6PKC3 985 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 BNC2Q6ZN30 1099 aaPredicted RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 CLEC17AQ6ZS10 378 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 C16orf59Q7L2K0 433 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 OTOP2Q7RTS6 562 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 CATSPER4Q7RTX7 472 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 KRT77Q7Z794 578 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 FAM178BQ8IXR5 827 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 DMRTC2Q8IXT2 367 aaPredicted RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 CNNM3Q8NE01 707 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 STAMQ92783 540 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 PAGE5Q96GU1 130 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 SPATA9Q9BWV2 254 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 FTHL17Q9BXU8 183 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 AGO3Q9H9G7 860 aaKnown RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 PARVGQ9HBI0 331 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 KMT5AQ9NQR1 393 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 LARSQ9P2J5 1176 aaKnown RBP5.56□□□□□ -1.52
CLIP1-217ENST00000543205 PADI3Q9ULW8 664 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 ST3GAL5Q9UNP4 418 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 DMTF1Q9Y222 760 aa5.56□□□□□ -1.52
CLIP1-217ENST00000543205 ABHD14A-ACY1A0A1B0GW23 586 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 A0A1W2PPC1 479 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 ANO9A1A5B4 782 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 DENND3A2RUS2 1198 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 H0YCG3 227 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 PIK3R2O00459 728 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 EFCAB14O75071 495 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 BAIAP3O94812 1187 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 GAP43P17677 238 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 FGFR4P22455 802 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 NPTX2P47972 431 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 KCNJ6P48051 423 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 EFNA5P52803 228 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 ASIC1P78348 528 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 TMPRSS15P98073 1019 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 MAPK7Q13164 816 aa5.55□□□□□ -1.52
CLIP1-217ENST00000543205 PCBP1Q15365 356 aaKnown RBP eCLIP5.55□□□□□ -1.52
CLIP1-217ENST00000543205 SEPT7Q16181 437 aaKnown RBP5.55□□□□□ -1.52
CLIP1-217ENST00000543205 CXorf57Q6NSI4 855 aaKnown RBP5.55□□□□□ -1.52
CLIP1-217ENST00000543205 PKN3Q6P5Z2 889 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms