RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 KCNT1Q5JUK3 1230 aa20.12■□□□□ 0.81
HDAC4-215ENST00000543185 NYAP1Q6ZVC0 841 aa20.12■□□□□ 0.81
HDAC4-215ENST00000543185 UNC45BQ8IWX7 931 aa20.12■□□□□ 0.81
HDAC4-215ENST00000543185 MS4A14Q96JA4 679 aa20.12■□□□□ 0.81
HDAC4-215ENST00000543185 RAD54BQ9Y620 910 aa20.12■□□□□ 0.81
HDAC4-215ENST00000543185 IL18RAPO95256 599 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 ALG13Q9NP73 1137 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 BSDC1Q9NW68 430 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 MAGI2Q86UL8 1455 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 MED14O60244 1454 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 STAT5AP42229 794 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 STAT5BP51692 787 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 CYP51A1Q16850 503 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 SHROOM1Q2M3G4 852 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 ANKMY2Q8IV38 441 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 C4orf33Q8N1A6 199 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 RPS6P62753 249 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 POLR3FQ9H1D9 316 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 GHRP10912 638 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 TWF2Q6IBS0 349 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 NAPEPLDQ6IQ20 393 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 PIPSLA2A3N6 862 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 RAD51CO43502 376 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 PRKAG2Q9UGJ0 569 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 PGK2P07205 417 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 WARSP23381 471 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 RSBN1Q5VWQ0 802 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 DBR1Q9UK59 544 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 SARSP49591 514 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 SLC29A2Q14542 456 aa20.11■□□□□ 0.81
HDAC4-215ENST00000543185 AGO2Q9UKV8 859 aaKnown RBP20.11■□□□□ 0.81
HDAC4-215ENST00000543185 CBFA2T3O75081 653 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 HOXA13P31271 388 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-215ENST00000543185 BTKQ06187 659 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 RGS20O76081 388 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 MUTP22033 750 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 TMEM79Q9BSE2 394 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 VTA1Q9NP79 307 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 DMPKQ09013 629 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 PID1Q7Z2X4 250 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 SLC22A9Q8IVM8 553 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 SNRNP27Q8WVK2 155 aaKnown RBP20.1■□□□□ 0.81
HDAC4-215ENST00000543185 UBXN6Q9BZV1 441 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 TRIM9Q9C026 710 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 KYQ8NBH2 561 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 L2HGDHQ9H9P8 463 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 ZNF185O15231 689 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 GLRA3O75311 464 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-215ENST00000543185 ECDO95905 644 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-215ENST00000543185 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-215ENST00000543185 MYRFQ9Y2G1 1151 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 AHI1Q8N157 1196 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 KCNF1Q9H3M0 494 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 CD248Q9HCU0 757 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 RPRD1BQ9NQG5 326 aaKnown RBP20.1■□□□□ 0.81
HDAC4-215ENST00000543185 AP3M1Q9Y2T2 418 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 KRT34O76011 436 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 UCHL3P15374 230 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 Q3C1V9 767 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 ATAD3BQ5T9A4 648 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 DLG3Q92796 817 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 CNTRLQ7Z7A1 2325 aa20.1■□□□□ 0.81
HDAC4-215ENST00000543185 TCN1P20061 433 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 JAK1P23458 1154 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 STIP1P31948 543 aaKnown RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 SNX31Q8N9S9 440 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 PHTF1Q9UMS5 762 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 F8VZ95 297 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 AKAP5P24588 427 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 C21orf59P57076 290 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 EFHC1Q5JVL4 640 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 C16orf62Q7Z3J2 963 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 CENPLQ8N0S6 344 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 VPS33AQ96AX1 596 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 TTLL4Q14679 1199 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 POTEGQ6S5H5 508 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 TRAPPC3O43617 180 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 USP39Q53GS9 565 aaKnown RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 NSUN6Q8TEA1 469 aaKnown RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 COMMD8Q9NX08 183 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 TPP2P29144 1249 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 BTBD8Q5XKL5 378 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 CDC73Q6P1J9 531 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 ANKS1AQ92625 1134 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 BNC1Q01954 994 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 KLHL17Q6TDP4 642 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 MCEEQ96PE7 176 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 FHDC1Q9C0D6 1143 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-215ENST00000543185 PCDHA6Q9UN73 950 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 PCDHA8Q9Y5H6 950 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 TAF4O00268 1085 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 STX11O75558 287 aa20.09■□□□□ 0.81
HDAC4-215ENST00000543185 FAM200BP0CF97 657 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms