RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 CFAP57Q96MR6 1250 aa14.96□□□□□ -0.02
PRAME-214ENST00000543184 HEY2Q9UBP5 337 aa14.96□□□□□ -0.02
PRAME-214ENST00000543184 MYH9P35579 1960 aaKnown RBP14.95□□□□□ -0.02
PRAME-214ENST00000543184 TCRBV7S3A2A0A539 114 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 TNNI1P19237 187 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 ALDH3A1P30838 453 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 SKIV2L2P42285 1042 aaKnown RBP14.95□□□□□ -0.02
PRAME-214ENST00000543184 GDF10P55107 478 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 MRPS9P82933 396 aaKnown RBP14.95□□□□□ -0.02
PRAME-214ENST00000543184 CCDC15Q0P6D6 951 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 NFX1Q12986 1120 aaKnown RBP14.95□□□□□ -0.02
PRAME-214ENST00000543184 NR1H3Q13133 447 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 PARP6Q2NL67 630 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 WDR72Q3MJ13 1102 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 FNBP1LQ5T0N5 605 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 CLNKQ7Z7G1 428 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 RHOT1Q8IXI2 618 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
PRAME-214ENST00000543184 LIASO43766 372 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 KRT1P04264 644 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 SERPINB3P29508 390 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 ALCAMQ13740 583 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 ACSBG2Q5FVE4 666 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 KCNT1Q5JUK3 1230 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 ZBTB41Q5SVQ8 909 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 RINLQ6ZS11 566 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 FBXO27Q8NI29 283 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 KCND2Q9NZV8 630 aa14.95□□□□□ -0.02
PRAME-214ENST00000543184 CCL15-CCL14A0A0B4J2E2 113 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 DNALI1O14645 258 aaPredicted RBP14.94□□□□□ -0.02
PRAME-214ENST00000543184 TYROBPO43914 113 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 HARSP12081 509 aaKnown RBP14.94□□□□□ -0.02
PRAME-214ENST00000543184 ATP6V1C1P21283 382 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 SARNPP82979 210 aaKnown RBP14.94□□□□□ -0.02
PRAME-214ENST00000543184 CAV1Q03135 178 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 CYP24A1Q07973 514 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 RCN2Q14257 317 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 CCL15Q16663 113 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 MON1BQ7L1V2 547 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 ZBTB45Q96K62 511 aaPredicted RBP14.94□□□□□ -0.02
PRAME-214ENST00000543184 ZNF395Q9H8N7 513 aaPredicted RBP14.94□□□□□ -0.02
PRAME-214ENST00000543184 KMT5AQ9NQR1 393 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 PCDHB4Q9Y5E5 795 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 WASF2Q9Y6W5 498 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 DCTN3O75935 186 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 NEFHP12036 1026 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 CCNG1P51959 295 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 SEPT7Q16181 437 aaKnown RBP14.94□□□□□ -0.02
PRAME-214ENST00000543184 CTC1Q2NKJ3 1217 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 SHKBP1Q8TBC3 707 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 C1orf112Q9NSG2 853 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 CCPG1Q9ULG6 757 aa14.94□□□□□ -0.02
PRAME-214ENST00000543184 AOC2O75106 756 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 CCNE2O96020 404 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 CENPCQ03188 943 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 TKFCQ3LXA3 575 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 C4orf50Q6ZRC1 276 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 LRRN4Q8WUT4 740 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 TEKT4Q8WW24 435 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 PTPN18Q99952 460 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 APOBEC3GQ9HC16 384 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 CLUHO75153 1309 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 LRRD1A4D1F6 860 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 CAPN9O14815 690 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 WFS1O76024 890 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 MARK3P27448 753 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 PTPN4P29074 926 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 OGDHQ02218 1023 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 MTMR1Q13613 665 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 MYBPC2Q14324 1141 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 NOL9Q5SY16 702 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 SNX30Q5VWJ9 437 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 SYDE1Q6ZW31 735 aaPredicted RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 ZC3H18Q86VM9 953 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 SCG3Q8WXD2 468 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 BRI3BPQ8WY22 251 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 TTC17Q96AE7 1141 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 CLPTM1LQ96KA5 538 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 TAAR1Q96RJ0 339 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 TSC22D3Q99576 134 aa14.93□□□□□ -0.02
PRAME-214ENST00000543184 WDR83Q9BRX9 315 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 CTDP1Q9Y5B0 961 aaPredicted RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.93□□□□□ -0.02
PRAME-214ENST00000543184 TESPA1A2RU30 521 aaPredicted RBP14.92□□□□□ -0.02
PRAME-214ENST00000543184 NVLO15381 856 aaKnown RBP14.92□□□□□ -0.02
PRAME-214ENST00000543184 MAGEB2O15479 319 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 LUC7L3O95232 432 aaKnown RBP14.92□□□□□ -0.02
PRAME-214ENST00000543184 HLA-DRAP01903 254 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 GLRA2P23416 452 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 MAN1A1P33908 653 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 CETN2P41208 172 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 ZBTB16Q05516 673 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 CYP4A22Q5TCH4 519 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 C3orf62Q6ZUJ4 267 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 ANO5Q75V66 913 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 RHPN2Q8IUC4 686 aa14.92□□□□□ -0.02
PRAME-214ENST00000543184 LMNTD2Q8IXW0 634 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms