RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 SEL1LQ9UBV2 794 aa16.71■□□□□ 0.27
CSF1R-209ENST00000543093 STYXL1Q9Y6J8 313 aa16.71■□□□□ 0.27
CSF1R-209ENST00000543093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.7■□□□□ 0.26
CSF1R-209ENST00000543093 MYMKA6NI61 221 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 TULP1O00294 542 aaPredicted RBP16.7■□□□□ 0.26
CSF1R-209ENST00000543093 SMARCB1Q12824 385 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 SV2CQ496J9 727 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 ATL3Q6DD88 541 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 CRELD2Q6UXH1 353 aaPredicted RBP16.7■□□□□ 0.26
CSF1R-209ENST00000543093 CEP68Q76N32 757 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 SYNPOQ8N3V7 929 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 POMGNT1Q8WZA1 660 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
CSF1R-209ENST00000543093 GKN1Q9NS71 199 aa16.7■□□□□ 0.26
CSF1R-209ENST00000543093 KPNA7A9QM74 516 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 IDEP14735 1019 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 CSRP2Q16527 193 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 PRR23CQ6ZRP0 262 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 ZNF720Q7Z2F6 126 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 TMEM150AQ86TG1 271 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 DCP1BQ8IZD4 617 aaKnown RBP16.69■□□□□ 0.26
CSF1R-209ENST00000543093 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 FAM160A2Q8N612 972 aaPredicted RBP16.69■□□□□ 0.26
CSF1R-209ENST00000543093 DNAJC19Q96DA6 116 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 PCDHB5Q9Y5E4 795 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 SPTBN2O15020 2390 aa16.69■□□□□ 0.26
CSF1R-209ENST00000543093 SLC30A4O14863 429 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 EXTL3O43909 919 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 IL18RAPO95256 599 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 F11P03951 625 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
CSF1R-209ENST00000543093 ADSSP30520 456 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 AVPR1AP37288 418 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 ME1P48163 572 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 GPR15P49685 360 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 NLRP12P59046 1061 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 POU5F1Q01860 360 aaKnown RBP16.68■□□□□ 0.26
CSF1R-209ENST00000543093 PKN3Q6P5Z2 889 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 WDR5BQ86VZ2 330 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 MAB21L3Q8N8X9 362 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 STKLD1Q8NE28 680 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 ZNF560Q96MR9 790 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 FAM83CQ9BQN1 747 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 LRRC27Q9C0I9 530 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 HPS4Q9NQG7 708 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 OLFML3Q9NRN5 406 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 TMLHEQ9NVH6 421 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 ZMYM5Q9UJ78 669 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 CCL26Q9Y258 94 aa16.68■□□□□ 0.26
CSF1R-209ENST00000543093 GREB1Q4ZG55 1949 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 ATG2BQ96BY7 2078 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 FRMD3A2A2Y4 597 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
CSF1R-209ENST00000543093 PPP1R37O75864 691 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 GCNT3O95395 438 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 HOXA6P31267 233 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
CSF1R-209ENST00000543093 TSPY1Q01534 308 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 BFSP1Q12934 665 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 RUNX3Q13761 415 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 POSTNQ15063 836 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 E2F4Q16254 413 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 TRIM68Q6AZZ1 485 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 SHC4Q6S5L8 630 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
CSF1R-209ENST00000543093 DHX58Q96C10 678 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 FAM213AQ9BRX8 229 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 EBF3Q9H4W6 596 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 PANK4Q9NVE7 773 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 MAGED2Q9UNF1 606 aaPredicted RBP16.67■□□□□ 0.26
CSF1R-209ENST00000543093 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
CSF1R-209ENST00000543093 OTOL1A6NHN0 477 aaPredicted RBP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 GDF9O60383 454 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 ITGB3P05106 788 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 DDX6P26196 483 aaKnown RBP eCLIP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 POLR2BP30876 1174 aaKnown RBP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 PNPLA4P41247 253 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 PXNP49023 591 aaPredicted RBP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 WNT7BP56706 349 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 DNM1Q05193 864 aaKnown RBP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 KCNA1Q09470 495 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 GRSF1Q12849 480 aaKnown RBP eCLIP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 ALCAMQ13740 583 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 TMEM196Q5HYL7 178 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 PPM1JQ5JR12 505 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
CSF1R-209ENST00000543093 SDHAF4Q5VUM1 108 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 TXNDC8Q6A555 127 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 FSTL4Q6MZW2 842 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 CCDC65Q8IXS2 484 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
CSF1R-209ENST00000543093 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms