RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 WDR72Q3MJ13 1102 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 NKD2Q969F2 451 aaPredicted RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 MYLK2Q9H1R3 596 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 DHX33Q9H6R0 707 aaKnown RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 PCDH9Q9HC56 1237 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 PICK1Q9NRD5 415 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 DDX56Q9NY93 547 aaKnown RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 SLC24A2Q9UI40 661 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 PARP14Q460N5 1801 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 ADGRA2Q96PE1 1338 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 TCRBV5S1A1TA0A578 114 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 CA4P22748 312 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 RPA3P35244 121 aaPredicted RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 CLNS1AP54105 237 aaKnown RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 TAP1Q03518 808 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 PIGHQ14442 188 aaPredicted RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 CAPN12Q6ZSI9 719 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 VSIG1Q86XK7 387 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 C4orf33Q8N1A6 199 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 UBR7Q8N806 425 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 LRRC8CQ8TDW0 803 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 SPOCK2Q92563 424 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 HAUS1Q96CS2 278 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 ERP27Q96DN0 273 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 LRRC37BQ96QE4 947 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 PSMC3IPQ9P2W1 217 aaPredicted RBP17.47■□□□□ 0.39
KDM2B-216ENST00000543025 SNCAIPQ9Y6H5 919 aa17.47■□□□□ 0.39
KDM2B-216ENST00000543025 SIP14410 1827 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 SPATA31C2B4DYI2 1134 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 SGK1O00141 431 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 PTPRAP18433 802 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 OAZ1P54368 228 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 PDIA2Q13087 525 aaKnown RBP17.46■□□□□ 0.39
KDM2B-216ENST00000543025 REPS2Q8NFH8 660 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 TMEM121Q9BTD3 319 aa17.46■□□□□ 0.39
KDM2B-216ENST00000543025 LRRD1A4D1F6 860 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 KIF3CO14782 793 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 EDF1O60869 148 aaKnown RBP17.46■□□□□ 0.38
KDM2B-216ENST00000543025 DCTN3O75935 186 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 OATP04181 439 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 ATP4AP20648 1035 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 ARL2P36404 184 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 CDKN2BP42772 138 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 PLCB3Q01970 1234 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 OGDHQ02218 1023 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 TXNRD3NBQ6F5E7 133 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 PCGF5Q86SE9 256 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 TMEM35BQ8NCS4 154 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 THOC1Q96FV9 657 aaKnown RBP17.46■□□□□ 0.38
KDM2B-216ENST00000543025 SLCO1B3Q9NPD5 702 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 ZNF302Q9NR11 478 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 GRID1Q9ULK0 1009 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 CHKBQ9Y259 395 aa17.46■□□□□ 0.38
KDM2B-216ENST00000543025 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.38
KDM2B-216ENST00000543025 TYROBPO43914 113 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 ITGBL1O95965 494 aaPredicted RBP17.45■□□□□ 0.38
KDM2B-216ENST00000543025 ASS1P00966 412 aaKnown RBP17.45■□□□□ 0.38
KDM2B-216ENST00000543025 IFNB1P01574 187 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 ALDH3A1P30838 453 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 AP3M2P53677 418 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 BACE1P56817 501 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 CRYMQ14894 314 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 NIPA2Q8N8Q9 360 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 ZNF518BQ9C0D4 1074 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 LRMDAQ9H2I8 198 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 ZNF214Q9UL59 606 aaPredicted RBP17.45■□□□□ 0.38
KDM2B-216ENST00000543025 MYH9P35579 1960 aaKnown RBP17.45■□□□□ 0.38
KDM2B-216ENST00000543025 WFS1O76024 890 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 SLC8A3P57103 927 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 HIF1AQ16665 826 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 PARP6Q2NL67 630 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 ACSF2Q96CM8 615 aaPredicted RBP17.45■□□□□ 0.38
KDM2B-216ENST00000543025 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 TMEM134Q9H6X4 195 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 CSADQ9Y600 493 aa17.45■□□□□ 0.38
KDM2B-216ENST00000543025 PTPRFP10586 1907 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 CST3P01034 146 aaPredicted RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 EDN1P05305 212 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 BRD2P25440 801 aaKnown RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 GEMIN4P57678 1058 aaKnown RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 ERICH1Q86X53 443 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 ANKRD13AQ8IZ07 590 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 MIEF2Q96C03 454 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 PHACTR1Q9C0D0 580 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 FETUBQ9UGM5 382 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 FARP1Q9Y4F1 1045 aaPredicted RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
KDM2B-216ENST00000543025 PHBP35232 272 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 SP2Q02086 613 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 SLC1A5Q15758 541 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 EFHC2Q5JST6 749 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 HHATQ5VTY9 493 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 POLNQ7Z5Q5 900 aa17.44■□□□□ 0.38
KDM2B-216ENST00000543025 WDR49Q8IV35 697 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms