RNA–Protein interactions for RNA: ENST00000542907.5

CWC15-204, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 3

Gene CWC15, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-204ENST00000542907 ZNF233A6NK53 670 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 SPTLC2O15270 562 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 PCSK1P29120 753 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 CTHP32929 405 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 SOX9P48436 509 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 PUM1Q14671 1186 aaKnown RBP eCLIP17.33■□□□□ 0.369e-6■■■■□ 23.7
CWC15-204ENST00000542907 ITPRIPL2Q3MIP1 535 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 TOP6BLQ8N6T0 577 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 LINC00301Q8NCQ3 95 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 ZSWIM2Q8NEG5 633 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 MRPS31Q92665 395 aaKnown RBP17.33■□□□□ 0.36
CWC15-204ENST00000542907 ANKRD36BP1Q96IX9 119 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 ZFYVE19Q96K21 471 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 PI4K2AQ9BTU6 479 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 GTSE1Q9NYZ3 720 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 UXTQ9UBK9 157 aaPredicted RBP17.33■□□□□ 0.36
CWC15-204ENST00000542907 GMEB2Q9UKD1 530 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 L1RE1Q9UN81 338 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 SNX9Q9Y5X1 595 aa17.33■□□□□ 0.36
CWC15-204ENST00000542907 GPR179Q6PRD1 2367 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 PPP6R2O75170 966 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 PRAMEF12O95522 483 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 TNNC2P02585 160 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 TDGF1P13385 188 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
CWC15-204ENST00000542907 SDHBP21912 280 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 WNT7BP56706 349 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 NLRP12P59046 1061 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 INTS6LQ5JSJ4 861 aaKnown RBP17.32■□□□□ 0.36
CWC15-204ENST00000542907 CC2D1AQ6P1N0 951 aaPredicted RBP17.32■□□□□ 0.36
CWC15-204ENST00000542907 DGLUCYQ7Z3D6 616 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 SYNPOQ8N3V7 929 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 MAB21L3Q8N8X9 362 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 IQUBQ8NA54 791 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 TTC8Q8TAM2 541 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 MTMR12Q9C0I1 747 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 KIAA1586Q9HCI6 787 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 TMLHEQ9NVH6 421 aa17.32■□□□□ 0.36
CWC15-204ENST00000542907 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
CWC15-204ENST00000542907 F11P03951 625 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 HMGA1P17096 107 aaKnown RBP17.31■□□□□ 0.36
CWC15-204ENST00000542907 AMPD2Q01433 879 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 PON2Q15165 354 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 DPH6Q7L8W6 267 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 SPATA2LQ8IUW3 424 aaPredicted RBP17.31■□□□□ 0.36
CWC15-204ENST00000542907 ADGRF2Q8IZF7 708 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 FGFBP2Q9BYJ0 223 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 KIF9Q9HAQ2 790 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 GKN1Q9NS71 199 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 TDP1Q9NUW8 608 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 KBTBD4Q9NVX7 518 aa17.31■□□□□ 0.36
CWC15-204ENST00000542907 SCN1AP35498 2009 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 PAPSS2O95340 614 aaPredicted RBP17.3■□□□□ 0.36
CWC15-204ENST00000542907 YEATS4O95619 227 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 ACAT1P24752 427 aaKnown RBP17.3■□□□□ 0.36
CWC15-204ENST00000542907 CYP2F1P24903 491 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 CNR2P34972 360 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 ASIC1P78348 528 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 SATB1Q01826 763 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 TNK2Q07912 1038 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 DDR2Q16832 855 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 CFAP221Q4G0U5 840 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 TXNDC11Q6PKC3 985 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 TMEM150AQ86TG1 271 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 MON1AQ86VX9 555 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 DHX58Q96C10 678 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 FUBP3Q96I24 572 aaKnown RBP eCLIP17.3■□□□□ 0.36
CWC15-204ENST00000542907 HPDLQ96IR7 371 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 TRIM9Q9C026 710 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
CWC15-204ENST00000542907 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
CWC15-204ENST00000542907 TFIP11Q9UBB9 837 aaKnown RBP17.3■□□□□ 0.36
CWC15-204ENST00000542907 SIX4Q9UIU6 781 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 GTF3C4Q9UKN8 822 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 FANCMQ8IYD8 2048 aa17.3■□□□□ 0.36
CWC15-204ENST00000542907 PRR5-ARHGAP8B1AHC4 643 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 GABRDO14764 452 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 EIF3DO15371 548 aaKnown RBP eCLIP17.29■□□□□ 0.36
CWC15-204ENST00000542907 CUTAO60888 179 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 GPR15P49685 360 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 ARHGAP8P85298 464 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 LMNB2Q03252 620 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 GRSF1Q12849 480 aaKnown RBP eCLIP17.29■□□□□ 0.36
CWC15-204ENST00000542907 RUNX3Q13761 415 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 GAS6Q14393 721 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 ZNF268Q14587 947 aaPredicted RBP17.29■□□□□ 0.36
CWC15-204ENST00000542907 MAPRE1Q15691 268 aaKnown RBP17.29■□□□□ 0.36
CWC15-204ENST00000542907 E2F4Q16254 413 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 SOWAHAQ2M3V2 549 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 TXNDC8Q6A555 127 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 LAIR1Q6GTX8 287 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 C4orf50Q6ZRC1 276 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
CWC15-204ENST00000542907 USP13Q92995 863 aaPredicted RBP17.29■□□□□ 0.36
CWC15-204ENST00000542907 EXOC4Q96A65 974 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms