RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 KCTD2Q14681 263 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 RASA2Q15283 850 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 PTPN20Q4JDL3 420 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 ATP13A4Q4VNC1 1196 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC38Q502W7 563 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SCARA5Q6ZMJ2 495 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 THNSL1Q8IYQ7 743 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 TTC13Q8NBP0 860 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 DCPSQ96C86 337 aaKnown RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 OTUD5Q96G74 571 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 RBM15Q96T37 977 aaKnown RBP eCLIP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 MMP19Q99542 508 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 MROH8Q9H579 483 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 ELP3Q9H9T3 547 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 RPF1Q9H9Y2 349 aaKnown RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 KLHL11Q9NVR0 708 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF148Q9UQR1 794 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 C3orf70A6NLC5 250 aaPredicted RBP6.9□□□□□ -1.31
PTPRO-208ENST00000542557 CCT8L1PA6NM43 557 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ADM5C9JUS6 153 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 INO80B-WBP1J3KQ70 363 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 MCF2P10911 925 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ATICP31939 592 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 NF2P35240 595 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 PHKA2P46019 1235 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ARSEP51690 589 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 PPARDQ03181 441 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ACAP1Q15027 740 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 KYAT1Q16773 422 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 HADHQ16836 314 aaKnown RBP6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF394Q53GI3 561 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF667Q5HYK9 610 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF484Q5JVG2 852 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.31
PTPRO-208ENST00000542557 EEF1DP3Q658K8 133 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 KAZNQ674X7 775 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 DENND1BQ6P3S1 775 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 PPP1R21Q6ZMI0 780 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 SHCBP1Q8NEM2 672 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 NLGN2Q8NFZ4 835 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 CKAP2Q8WWK9 683 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 NLRP4Q96MN2 994 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 PWWP2AQ96N64 755 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 FAM118BQ9BPY3 351 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 INO80BQ9C086 356 aaPredicted RBP6.9□□□□□ -1.31
PTPRO-208ENST00000542557 FHDC1Q9C0D6 1143 aaPredicted RBP6.9□□□□□ -1.31
PTPRO-208ENST00000542557 ASB7Q9H672 318 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 CYP3A43Q9HB55 503 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 UBN1Q9NPG3 1134 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 DNAJC17Q9NVM6 304 aaKnown RBP6.9□□□□□ -1.31
PTPRO-208ENST00000542557 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 CTNNAL1Q9UBT7 734 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 SIX4Q9UIU6 781 aa6.9□□□□□ -1.31
PTPRO-208ENST00000542557 LRRD1A4D1F6 860 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 B4GALT5O43286 388 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SNX3O60493 162 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 LRCH4O75427 683 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 RASSF9O75901 435 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 DNAJC8O75937 253 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 STAU1O95793 577 aaKnown RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 PGK2P07205 417 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 VIMP08670 466 aaKnown RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CXCL8P10145 99 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 KRT3P12035 628 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 BRAFP15056 766 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 OSBPP22059 807 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 PSMA2P25787 234 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 HNRNPH1P31943 449 aaKnown RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 GABRB2P47870 512 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SCTRP47872 440 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SLC18A1P54219 525 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 RAD23BP54727 409 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 MOGSQ13724 837 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF268Q14587 947 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 TTLL4Q14679 1199 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CYP4A22Q5TCH4 519 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 TXNRD3NBQ6F5E7 133 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 EFCAB12Q6NXP0 572 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 ARHGEF18Q6ZSZ5 1173 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 BBS12Q6ZW61 710 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 PCGF5Q86SE9 256 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 FBXO16Q8IX29 292 aaPredicted RBP6.89□□□□□ -1.31
PTPRO-208ENST00000542557 LINC01465Q8N7H1 131 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 CEP120Q8N960 986 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 C1orf127Q8N9H9 656 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 DYDC1Q8WWB3 177 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 MAML1Q92585 1016 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 C9orf72Q96LT7 481 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 TXNRD2Q9NNW7 524 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 ERAP1Q9NZ08 941 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 POLIQ9UNA4 740 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 NAALADL1Q9UQQ1 740 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 PLXNA1Q9UIW2 1896 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 COL1A2P08123 1366 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 ASB14A6NK59 587 aa6.89□□□□□ -1.31
PTPRO-208ENST00000542557 SMAPO00193 183 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms