RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ABI2Q9NYB9 513 aaPredicted RBP16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 CDH9Q9ULB4 789 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 NME7Q9Y5B8 376 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 PTPRDP23468 1912 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 CETN3O15182 167 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 ATP2C2O75185 946 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 SRFP11831 508 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 MYL4P12829 197 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 COL9A1P20849 921 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 GNL1P36915 607 aaPredicted RBP16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 LRRC63Q05C16 580 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 PPP3CAQ08209 521 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 MORC3Q14149 939 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 SGSM1Q2NKQ1 1148 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 GAREM2Q75VX8 874 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 ST13P5Q8NFI4 369 aaPredicted RBP16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 TAF4BQ92750 862 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 FUBP3Q96I24 572 aaKnown RBP eCLIP16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 ZSWIM3Q96MP5 696 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 SYT15Q9BQS2 421 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 PI4K2AQ9BTU6 479 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 CRTAC1Q9NQ79 661 aa16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
ECHDC2-223ENST00000542552 ECI2O75521 394 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 FGF19O95750 216 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 ASS1P00966 412 aaKnown RBP16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 PDGFRBP09619 1106 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 TRIM49P0CI25 452 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 TRIM49CP0CI26 452 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 KRT13P13646 458 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 HMGA1P17096 107 aaKnown RBP16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 FCARP24071 287 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 CYP2F1P24903 491 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 GTF2H1P32780 548 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 MAGEA11P43364 429 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 FKBP3Q00688 224 aaKnown RBP16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 ISM2Q6H9L7 571 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 FBXL6Q8N531 539 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 SNX25Q9H3E2 840 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 TRPV4Q9HBA0 871 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 IL21Q9HBE4 155 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 SLC2A4RGQ9NR83 387 aa16.52■□□□□ 0.24
ECHDC2-223ENST00000542552 DENND4CQ5VZ89 1909 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 PPP1R3GB7ZBB8 358 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 PSMA7O14818 248 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 SLC16A3O15427 465 aaKnown RBP16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 PDGFBP01127 241 aaPredicted RBP16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 HLA-DRAP01903 254 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 GJA1P17302 382 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 CCNE1P24864 410 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 PPP1R2P41236 205 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 GCLMP48507 274 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 CDH8P55286 799 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 PSMC1P62191 440 aaKnown RBP16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 VEPH1Q14D04 833 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 TEAD2Q15562 447 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 MAPRE1Q15691 268 aaKnown RBP16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 ZNF667Q5HYK9 610 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 TANGO2Q6ICL3 276 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 MYCBPAPQ8TBZ2 947 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 GIPC2Q8TF65 315 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 SMARCD2Q92925 531 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 ELSPBP1Q96BH3 223 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 ASB16Q96NS5 453 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 TSG101Q99816 390 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 GPR88Q9GZN0 384 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 SMYD3Q9H7B4 428 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 WNT16Q9UBV4 365 aa16.51■□□□□ 0.23
ECHDC2-223ENST00000542552 KMT2EQ8IZD2 1858 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 A0A1W2PRU2 124 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 PTPN1P18031 435 aaKnown RBP16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 GPR15P49685 360 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 RPL10AP62906 217 aaKnown RBP16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 STIM1Q13586 685 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 DDR2Q16832 855 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 C4orf50Q6ZRC1 276 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 SPATA2LQ8IUW3 424 aaPredicted RBP16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 OR6B3Q8NGW1 331 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 FAM200AQ8TCP9 573 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 GPR152Q8TDT2 470 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 TAS1R2Q8TE23 839 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 MYLPFQ96A32 169 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 KXD1Q9BQD3 176 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 PLA2G2FQ9BZM2 168 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 RAPGEFL1Q9UHV5 662 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 GREB1Q4ZG55 1949 aa16.5■□□□□ 0.23
ECHDC2-223ENST00000542552 MUC6Q6W4X9 2439 aa16.49■□□□□ 0.23
ECHDC2-223ENST00000542552 OBSL1O75147 1896 aa16.49■□□□□ 0.23
ECHDC2-223ENST00000542552 NOL4O94818 638 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms