RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ORC1Q13415 861 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 NFE2Q16621 373 aaPredicted RBP24.58■■□□□ 1.53
HOMER3-205ENST00000542541 SPC24Q8NBT2 197 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 MYCBPAPQ8TBZ2 947 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 AIPL1Q9NZN9 384 aa24.58■■□□□ 1.53
HOMER3-205ENST00000542541 MFAP3LO75121 409 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 VDRP11473 427 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 CD19P15391 556 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 RPL17P18621 184 aaKnown RBP24.57■■□□□ 1.52
HOMER3-205ENST00000542541 CLCN1P35523 988 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 ARPP19P56211 112 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 GPR17Q13304 367 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 SGO2Q562F6 1265 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 FAM171BQ6P995 826 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 MRPL38Q96DV4 380 aaKnown RBP24.57■■□□□ 1.52
HOMER3-205ENST00000542541 CRTAC1Q9NQ79 661 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 GTF3C4Q9UKN8 822 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 TEX28O15482 410 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 ATP2C2O75185 946 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 ADH1AP07327 375 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 CNPP09543 421 aaKnown RBP24.57■■□□□ 1.52
HOMER3-205ENST00000542541 IRS1P35568 1242 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 RAB33AQ14088 237 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 ASIC2Q16515 512 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 HABP4Q5JVS0 413 aaKnown RBP24.57■■□□□ 1.52
HOMER3-205ENST00000542541 RSPO2Q6UXX9 243 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-205ENST00000542541 KLHL5Q96PQ7 755 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 ZNHIT6Q9NWK9 470 aaKnown RBP24.57■■□□□ 1.52
HOMER3-205ENST00000542541 VWA8A3KMH1 1905 aa24.57■■□□□ 1.52
HOMER3-205ENST00000542541 PLXNA4Q9HCM2 1894 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 MYBPHLA2RUH7 354 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 RFXAPO00287 272 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 MED7O43513 233 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 CSPG5O95196 566 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 GNA15P30679 374 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 ARID5AQ03989 594 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 STILQ15468 1287 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 SLC39A12Q504Y0 691 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 MDH1BQ5I0G3 518 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 TPGS2Q68CL5 300 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 C4orf50Q6ZRC1 276 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 LRRTM3Q86VH5 581 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 ZNF461Q8TAF7 563 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 C2orf15Q8WU43 125 aaKnown RBP24.56■■□□□ 1.52
HOMER3-205ENST00000542541 PPP2R3CQ969Q6 453 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 TMEM209Q96SK2 561 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 DNAJC7Q99615 494 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 PKMYT1Q99640 499 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 TTYH1Q9H313 450 aaPredicted RBP24.56■■□□□ 1.52
HOMER3-205ENST00000542541 LMCD1Q9NZU5 365 aa24.56■■□□□ 1.52
HOMER3-205ENST00000542541 HIDE1A8MVS5 230 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 OR4Q2P0C623 313 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 KLRC2P26717 231 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 PDE6CP51160 858 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 ADKP55263 362 aaKnown RBP24.55■■□□□ 1.52
HOMER3-205ENST00000542541 ROR1Q01973 937 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 ARID5BQ14865 1188 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 GPR153Q6NV75 609 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 SLC47A2Q86VL8 602 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 C12orf29Q8N999 325 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 CYFIP2Q96F07 1278 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 MAFFQ9ULX9 164 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 BZW2Q9Y6E2 419 aaKnown RBP24.55■■□□□ 1.52
HOMER3-205ENST00000542541 TSC2P49815 1807 aa24.55■■□□□ 1.52
HOMER3-205ENST00000542541 CYP11B1P15538 503 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 HNRNPH3P31942 346 aaKnown RBP24.54■■□□□ 1.52
HOMER3-205ENST00000542541 ARHGAP17Q68EM7 881 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 IRF2BP2Q7Z5L9 587 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 SPATA2LQ8IUW3 424 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-205ENST00000542541 GLYCTKQ8IVS8 523 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 PCED1BQ96HM7 432 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 LRCH3Q96II8 777 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 PRDM12Q9H4Q4 367 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 ABHD10Q9NUJ1 306 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 PCDHB5Q9Y5E4 795 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 ATP8B3O60423 1300 aa24.54■■□□□ 1.52
HOMER3-205ENST00000542541 ADAM12O43184 909 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 THAP12O43422 761 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 C1RP00736 705 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 GSDMDP57764 484 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 CYP27A1Q02318 531 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 CNGA2Q16280 664 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 ZNF677Q86XU0 584 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 ZNF606Q8WXB4 792 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 FUBP3Q96I24 572 aaKnown RBP eCLIP24.53■■□□□ 1.52
HOMER3-205ENST00000542541 HNRNPABQ99729 332 aaKnown RBP24.53■■□□□ 1.52
HOMER3-205ENST00000542541 FAM49BQ9NUQ9 324 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 WDR27A2RRH5 827 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 ABLIM3O94929 683 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 PRKCIP41743 596 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 KLHL30Q0D2K2 578 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 GRIN2CQ14957 1233 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 TC2NQ8N9U0 490 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 SPPL2BQ8TCT7 592 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 TFAP2BQ92481 460 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 MYLPFQ96A32 169 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 MED10Q9BTT4 135 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 ABCB6Q9NP58 842 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 ACP6Q9NPH0 428 aa24.53■■□□□ 1.52
HOMER3-205ENST00000542541 AFF4Q9UHB7 1163 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms