RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MTHFD2P13995 350 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ITGB5P18084 799 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CCND3P30281 292 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CYP2C19P33261 490 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 SLC16A2P36021 539 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RAB27AP51159 221 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 MRPL12P52815 198 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ALDH6A1Q02252 535 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ADCY2Q08462 1091 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ZNF543Q08ER8 600 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PIN1Q13526 163 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 WTAPQ15007 396 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 NFE2Q16621 373 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CR1LQ2VPA4 569 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ASPRV1Q53RT3 343 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 TMC5Q6UXY8 1006 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CXorf67Q86X51 503 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 C1orf162Q8NEQ5 155 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 LMBR1Q8WVP7 490 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RAX2Q96IS3 184 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CLIC6Q96NY7 704 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 MYL10Q9BUA6 226 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 MAF1Q9H063 256 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RANBP17Q9H2T7 1088 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 MS4A5Q9H3V2 200 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 POFUT1Q9H488 388 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 DLL4Q9NR61 685 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RNF146Q9NTX7 359 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 DNAJC28Q9NX36 388 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 GALNT8Q9NY28 637 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 FLRT1Q9NZU1 646 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ZIM2Q9NZV7 527 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ARHGAP20Q9P2F6 1191 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 DDX20Q9UHI6 824 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ZNF180Q9UJW8 692 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CCPG1Q9ULG6 757 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 LUC7L2Q9Y383 392 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RIPK3Q9Y572 518 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 RBM8AQ9Y5S9 174 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PLXNB2O15031 1838 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PFASO15067 1338 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 FRMPD2Q68DX3 1309 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ZNFX1Q9P2E3 1918 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 A0A0G2JMZ2 1700 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 COL11A1P12107 1806 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 PARP14Q460N5 1801 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 TEX51A0A1B0GUA7 166 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 ZNF503-AS2A6NEH8 195 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 AKAP10O43572 662 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 RBP3P10745 1247 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 RARBP10826 455 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 ENPP1P22413 925 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 MCM5P33992 734 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 BCAR1P56945 870 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 KRT32Q14532 448 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 PDCD1Q15116 288 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 MLANAQ16655 118 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 FSCN1Q16658 493 aaKnown RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 INAVAQ3KP66 663 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 KIAA1841Q6NSI8 718 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 CCDC62Q6P9F0 684 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 MAMDC4Q6UXC1 1216 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 SYNE3Q6ZMZ3 975 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 CATIPQ7Z7H3 387 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 RTN4RL1Q86UN2 441 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 WDR75Q8IWA0 830 aaKnown RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 CBARPQ8N350 705 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 FAM26EQ8N5C1 309 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 ENAHQ8N8S7 591 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 FOXRED1Q96CU9 486 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 PAWRQ96IZ0 340 aaKnown RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 IL25Q9H293 177 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 ABHD16BQ9H3Z7 469 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 C11orf49Q9H6J7 331 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 ADD3Q9UEY8 706 aaKnown RBP6.16□□□□□ -1.42
CPSF7-220ENST00000541963 IP6K2Q9UHH9 426 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 INVSQ9Y283 1065 aa6.16□□□□□ -1.42
CPSF7-220ENST00000541963 ZNF236Q9UL36 1845 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 LOC102724159A0A0B4J2E5 919 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 LCHNA4D1U4 455 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CCDC69A6NI79 296 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 KBTBD13C9JR72 458 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 KLRF2D3W0D1 207 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 NFIBO00712 420 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 SEMA7AO75326 666 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 REC8O95072 547 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 GOLGA8HP0CJ92 632 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CALM1P0DP23 149 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CALM2P0DP24 149 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CALM3P0DP25 149 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CYBAP13498 195 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 AKR1A1P14550 325 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 ZSCAN20P17040 1043 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 APEX1P27695 318 aaKnown RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 MC4RP32245 332 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 KIF5BP33176 963 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms