RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 CALUO43852 315 aaPredicted RBP23.65■■□□□ 1.38
C2CD3-216ENST00000541922 PHACTR2O75167 634 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 PSMC3P17980 439 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 CDC25CP30307 473 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 VIPR2P41587 438 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 CASP4P49662 377 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 STXBP5Q5T5C0 1151 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 GPR158Q5T848 1215 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 VITQ6UXI7 678 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 SPATA2LQ8IUW3 424 aaPredicted RBP23.65■■□□□ 1.38
C2CD3-216ENST00000541922 CCDC105Q8IYK2 499 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 DTWD2Q8NBA8 298 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 PARD3BQ8TEW8 1205 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 DEPDC1BQ8WUY9 529 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 KBTBD7Q8WVZ9 684 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 ATOH1Q92858 354 aaPredicted RBP23.65■■□□□ 1.38
C2CD3-216ENST00000541922 E2F7Q96AV8 911 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 SIT1Q9Y3P8 196 aa23.65■■□□□ 1.38
C2CD3-216ENST00000541922 WARSP23381 471 aaKnown RBP23.64■■□□□ 1.37
C2CD3-216ENST00000541922 CYP2F1P24903 491 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 AP3M2P53677 418 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 RPL10AP62906 217 aaKnown RBP23.64■■□□□ 1.37
C2CD3-216ENST00000541922 TNNC1P63316 161 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 BIRC3Q13489 604 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 KCNB1Q14721 858 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 WDR72Q3MJ13 1102 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 PLEKHO2Q8TD55 490 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 DNASE1L2Q92874 299 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 SYT15Q9BQS2 421 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 FOXQ1Q9C009 403 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 IL21Q9HBE4 155 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 CDH9Q9ULB4 789 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 MIA3Q5JRA6 1907 aa23.64■■□□□ 1.37
C2CD3-216ENST00000541922 KANSL1LA0AUZ9 987 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 MYBPHLA2RUH7 354 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 HEPACAM2A8MVW5 462 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 LMO2P25791 158 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 GDI1P31150 447 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 ATICP31939 592 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 GPR15P49685 360 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 MYL6P60660 151 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 CFAP221Q4G0U5 840 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 CEP135Q66GS9 1140 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 FAM171BQ6P995 826 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 ALYREFQ86V81 257 aaKnown RBP23.63■■□□□ 1.37
C2CD3-216ENST00000541922 ARID3BQ8IVW6 561 aaPredicted RBP23.63■■□□□ 1.37
C2CD3-216ENST00000541922 MFSD6LQ8IWD5 586 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 PJA1Q8NG27 643 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 NUP210Q8TEM1 1887 aaPredicted RBP23.63■■□□□ 1.37
C2CD3-216ENST00000541922 IRF7Q92985 503 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 SYAP1Q96A49 352 aaPredicted RBP23.63■■□□□ 1.37
C2CD3-216ENST00000541922 FUBP3Q96I24 572 aaKnown RBP eCLIP23.63■■□□□ 1.37
C2CD3-216ENST00000541922 SNX25Q9H3E2 840 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 TASP1Q9H6P5 420 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 FAM86C1Q9NVL1 165 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 MAPK8IP1Q9UQF2 711 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 TRAF3IP3Q9Y228 551 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 FRMD4BQ9Y2L6 1034 aa23.63■■□□□ 1.37
C2CD3-216ENST00000541922 WDFY4Q6ZS81 3184 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 LRRIQ3A6PVS8 624 aaPredicted RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 ATP2C2O75185 946 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 CLSTN1O94985 981 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 STAU1O95793 577 aaKnown RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 DCNP07585 359 aaKnown RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 PDGFRBP09619 1106 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 CSH1P0DML2 217 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 CSH2P0DML3 217 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 PSMC1P62191 440 aaKnown RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 CLDN10P78369 228 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 CYP4F8P98187 520 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 MAPRE1Q15691 268 aaKnown RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 DDR2Q16832 855 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 CCDC142Q17RM4 750 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 SDHAF4Q5VUM1 108 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 C4orf50Q6ZRC1 276 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 TPRG1Q6ZUI0 275 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 YAF2Q8IY57 180 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 MKNK1Q9BUB5 465 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 DDX23Q9BUQ8 820 aaKnown RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 HEBP1Q9NRV9 189 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 NXF1Q9UBU9 619 aaKnown RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 MAGED2Q9UNF1 606 aaPredicted RBP23.62■■□□□ 1.37
C2CD3-216ENST00000541922 DENND4CQ5VZ89 1909 aa23.62■■□□□ 1.37
C2CD3-216ENST00000541922 COL4A3Q01955 1670 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 DPYSL4O14531 572 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 ZNF263O14978 683 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 TACC1O75410 805 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 FAM163BP0C2L3 166 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 HMGA1P17096 107 aaKnown RBP23.61■■□□□ 1.37
C2CD3-216ENST00000541922 GNL1P36915 607 aaPredicted RBP23.61■■□□□ 1.37
C2CD3-216ENST00000541922 MRE11P49959 708 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 UBXN2BQ14CS0 331 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 TDRD10Q5VZ19 366 aaKnown RBP23.61■■□□□ 1.37
C2CD3-216ENST00000541922 GPIHBP1Q8IV16 184 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 FMR1NBQ8N0W7 255 aaPredicted RBP23.61■■□□□ 1.37
C2CD3-216ENST00000541922 GUF1Q8N442 669 aaKnown RBP23.61■■□□□ 1.37
C2CD3-216ENST00000541922 OR6B3Q8NGW1 331 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 PHOX2BQ99453 314 aa23.61■■□□□ 1.37
C2CD3-216ENST00000541922 MRPL45Q9BRJ2 306 aaKnown RBP23.61■■□□□ 1.37
C2CD3-216ENST00000541922 XYLT2Q9H1B5 865 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms