RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 K7ESF4 209 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 DPYSL4O14531 572 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 TGFB1I1O43294 461 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 MOSPD3O75425 235 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 MICAL2O94851 1124 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 ADSSP30520 456 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 PPP1R2P41236 205 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 MATR3P43243 847 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 CAMK4Q16566 473 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 XKR4Q5GH76 650 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 DGKKQ5KSL6 1271 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 STPG1Q5TH74 334 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 TPGS2Q68CL5 300 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 ZNF280DQ6N043 979 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 C12orf56Q8IXR9 622 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 CEP120Q8N960 986 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 TRIML1Q8N9V2 468 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 GOLGA5Q8TBA6 731 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 MSANTD3Q96H12 275 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 ZFYVE19Q96K21 471 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 ACAP3Q96P50 834 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 PGLYRP2Q96PD5 576 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 NUP62CLQ9H1M0 184 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 KCTD10Q9H3F6 313 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 C8orf33Q9H7E9 229 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 PLEKHA5Q9HAU0 1116 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 TOPORSQ9NS56 1045 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 C2orf42Q9NWW7 574 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 MAN1B1Q9UKM7 699 aa9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 AGO2Q9UKV8 859 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-212ENST00000541770 ATG2BQ96BY7 2078 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 ZNF638Q14966 1978 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 C1QTNF9BB2RNN3 333 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 TISP43B9A030 160 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 PDXKO00764 312 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 SYN3O14994 580 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CHADO15335 359 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 RPP40O75818 363 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 KCNK5O95279 499 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 PROS1P07225 676 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 ADRB2P07550 413 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CLTAP09496 248 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 ZNF806P0C7X5 589 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 C1QTNF9P0C862 333 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CTHP32929 405 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 LIMK1P53667 647 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 FOXC1Q12948 553 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 MORC3Q14149 939 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 MYBPC2Q14324 1141 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 NFIL3Q16649 462 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 STXBP5Q5T5C0 1151 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 RNF43Q68DV7 783 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 PSAPL1Q6NUJ1 521 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 ARMCX5Q6P1M9 558 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 C1orf228Q6PIY5 440 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 ALKAL1Q6UXT8 129 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 RNF19BQ6ZMZ0 732 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 RBM43Q6ZSC3 357 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 KBTBD6Q86V97 674 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 WDR5BQ86VZ2 330 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 SLC9A9Q8IVB4 645 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CD302Q8IX05 232 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 LEMD2Q8NC56 503 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 SHKBP1Q8TBC3 707 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 E2F7Q96AV8 911 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 RSPRY1Q96DX4 576 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 TSPAN18Q96SJ8 248 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CBWD1Q9BRT8 395 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 MSTO1Q9BUK6 570 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 GPR88Q9GZN0 384 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 IKZF4Q9H2S9 585 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 KIAA1586Q9HCI6 787 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 AGPAT3Q9NRZ7 376 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 SLC38A7Q9NVC3 462 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 GTSE1Q9NYZ3 720 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CNTN3Q9P232 1028 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 TRAF3IP3Q9Y228 551 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 TPRP12270 2363 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 ACACBO00763 2458 aa9.38□□□□□ -0.91
CLSTN3-212ENST00000541770 TTC26A0AVF1 554 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 ARNTLO00327 626 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 CALUO43852 315 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 EXTL3O43909 919 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 EPN2O95208 641 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 OR4Q2P0C623 313 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 KCNE1P15382 129 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 BMP6P22004 513 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 PRCPP42785 496 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 SHC2P98077 582 aa9.37□□□□□ -0.91
CLSTN3-212ENST00000541770 STIM1Q13586 685 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms