RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
PTPN1-202ENST00000541713 WDTC1Q8N5D0 677 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 AGAP11Q8TF27 550 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 CPXM1Q96SM3 734 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 NTPCRQ9BSD7 190 aaKnown RBP14.26□□□□□ -0.13
PTPN1-202ENST00000541713 UBN1Q9NPG3 1134 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 ATP6V1G2O95670 118 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CYP1A1P04798 512 aaPredicted RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 HADHBP55084 474 aaKnown RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 TGFB2P61812 414 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 MGAT5Q09328 741 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CCNG2Q16589 344 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 KCTD17Q8N5Z5 321 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 LRRC8CQ8TDW0 803 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 PGLYRP2Q96PD5 576 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 MAK16Q9BXY0 300 aaKnown RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 FAM49AQ9H0Q0 323 aaPredicted RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 IP6K2Q9UHH9 426 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 MAD1L1Q9Y6D9 718 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CLNS1AP54105 237 aaKnown RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CDH6P55285 790 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 ZBTB16Q05516 673 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 PIGWQ7Z7B1 504 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 ECHDC2Q86YB7 292 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 FBXO36Q8NEA4 188 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 SERPINB12Q96P63 405 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CAMKK2Q96RR4 588 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CGRRF1Q99675 332 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 GRID1Q9ULK0 1009 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 PHTF1Q9UMS5 762 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 LTBP1Q14766 1721 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 PLA2G6O60733 806 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
PTPN1-202ENST00000541713 NCALDP61601 193 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 IL9RQ01113 521 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CLUL1Q15846 466 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 Q3C1V9 767 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 CCDC91Q7Z6B0 441 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 SLC17A7Q9P2U7 560 aa14.25□□□□□ -0.13
PTPN1-202ENST00000541713 TMEM191CA6NGB0 347 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 FAM47DPA6NHR8 397 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 IRF6O14896 467 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 DKC1O60832 514 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 RBP3P10745 1247 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 MMP8P22894 467 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 SLC1A1P43005 524 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 RABGGTBP53611 331 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 BMPR2Q13873 1038 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 VGLL4Q14135 290 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 HIF1AQ16665 826 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 EMC10Q5UCC4 262 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 EFCAB12Q6NXP0 572 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 SPATA18Q8TC71 538 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 MORC4Q8TE76 937 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CXCL16Q9H2A7 254 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 ZNF395Q9H8N7 513 aaPredicted RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 SCINQ9Y6U3 715 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 C5orf60A6NFR6 353 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 ADCY3O60266 1144 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 MTA2O94776 668 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 PAEPP09466 180 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 TAC1P20366 129 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 PPP2R5DQ14738 602 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CGB2Q6NT52 195 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CATSPERGQ6ZRH7 1159 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 YTHDF3Q7Z739 585 aaKnown RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 MYLK2Q9H1R3 596 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 HOXC10Q9NYD6 342 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 IKBKGQ9Y6K9 419 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CCDC78A2IDD5 438 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CFAP69A5D8W1 941 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 TOP3BO95985 862 aaKnown RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 TNNC2P02585 160 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 ZNF286BP0CG31 522 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 NAMPTP43490 491 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 ATXN1P54253 815 aaKnown RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 EIF3EP60228 445 aaKnown RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 KLF1Q13351 362 aaPredicted RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 SLFN12LQ6IEE8 588 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 LRRC6Q86X45 466 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 ZBTB8OSQ8IWT0 167 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 PPM1NQ8N819 430 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 VTI1AQ96AJ9 217 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CFAP57Q96MR6 1250 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 B3GNT5Q9BYG0 378 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 NIF3L1Q9GZT8 377 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 IL1RAPL1Q9NZN1 696 aa14.24□□□□□ -0.13
PTPN1-202ENST00000541713 XPO7Q9UIA9 1087 aaKnown RBP14.24□□□□□ -0.13
PTPN1-202ENST00000541713 CNTNAP2Q9UHC6 1331 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms