RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CHKAP35790 457 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 ATP8B2P98198 1209 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 CDC42EP1Q00587 391 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 CREMQ03060 361 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 ATP2B3Q16720 1220 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 FAM209BQ5JX69 171 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 HECTD2Q5U5R9 776 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 IZUMO3Q5VZ72 239 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 PGBD2Q6P3X8 592 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 CCDC174Q6PII3 467 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 APOA5Q6Q788 366 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 HEATR3Q7Z4Q2 680 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 LIX1LQ8IVB5 337 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 TMEM132CQ8N3T6 1108 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 SUPT20HQ8NEM7 779 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 BRIX1Q8TDN6 353 aaKnown RBP5.01□□□□□ -1.61
SNHG1-217ENST00000541578 ZG16BQ96DA0 208 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 ADAM2Q99965 735 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 TOR3AQ9H497 397 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 RNPEPQ9H4A4 650 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 CASS4Q9NQ75 786 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 FBXO34Q9NWN3 711 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 ABCF2Q9UG63 623 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 PCDHA3Q9Y5H8 950 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 NOX1Q9Y5S8 564 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 TCRBV7S2A1N4TA0A589 114 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 PIPSLA2A3N6 862 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 FRS3O43559 492 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 PIP5K1CO60331 668 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 SPDEFO95238 335 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 CKBP12277 381 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 TYRP1P17643 537 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 GCSHP23434 173 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 PPM1AP35813 382 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 AVPR1BP47901 424 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 RENBPP51606 427 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 HK3P52790 923 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 CTXN1P60606 82 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 BLOC1S1P78537 153 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 ICA1Q05084 483 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 TP53BP2Q13625 1128 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 RAB39AQ14964 217 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 DGKKQ5KSL6 1271 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 ABHD17BQ5VST6 288 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 FOXR2Q6PJQ5 311 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 Q6YL49 198 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 SYTL1Q8IYJ3 562 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 TEX19Q8NA77 164 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 BEND2Q8NDZ0 799 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 GPR150Q8NGU9 434 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 SUCLG2Q96I99 432 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 TMX3Q96JJ7 454 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 ZSWIM1Q9BR11 485 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 MYLK2Q9H1R3 596 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 GSTO2Q9H4Y5 243 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 PNPOQ9NVS9 261 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 FNIP2Q9P278 1114 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 CDC23Q9UJX2 597 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 PLB1Q6P1J6 1458 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 TEX14Q8IWB6 1497 aa5□□□□□ -1.61
SNHG1-217ENST00000541578 ERICH3Q5RHP9 1530 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 ABCA5Q8WWZ7 1642 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 LRRC14BA6NHZ5 514 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 KIAA0391O15091 583 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 CDKL5O76039 1030 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 PRSS23O95084 383 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 IL18RAPO95256 599 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 PARP1P09874 1014 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 HKR1P10072 659 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 KITP10721 976 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 PROZP22891 400 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 GRK6P43250 576 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 CASP5P51878 434 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 COL10A1Q03692 680 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 OCA2Q04671 838 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 BLMHQ13867 455 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 KHDC1Q4VXA5 237 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 CCDC38Q502W7 563 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 KHDC1LQ5JSQ8 128 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 DACT2Q5SW24 774 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 SWSAP1Q6NVH7 229 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 TICAM2Q86XR7 235 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 FITM2Q8N6M3 262 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 NLGN4YQ8NFZ3 816 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 NSUN6Q8TEA1 469 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 RAB24Q969Q5 203 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 KIAA1191Q96A73 305 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 BOD1Q96IK1 185 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 COQ10AQ96MF6 247 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 NT5C1BQ96P26 610 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 VRK1Q99986 396 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 ALOXE3Q9BYJ1 711 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
SNHG1-217ENST00000541578 UNKQ9C0B0 810 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 WDR12Q9GZL7 423 aaKnown RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 C11orf54Q9H0W9 315 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-217ENST00000541578 ZMAT3Q9HA38 289 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms