RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TMEM161BQ8NDZ6 487 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 TSTD1Q8NFU3 115 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 SNX29Q8TEQ0 813 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 GTF3C6Q969F1 213 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 ZCWPW1Q9H0M4 648 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 BPTFQ12830 3046 aa12.79□□□□□ -0.36
COPA-205ENST00000541366 PTPRDP23468 1912 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 MYH11P35749 1972 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 MAPTP10636 758 aaKnown RBP12.78□□□□□ -0.36
COPA-205ENST00000541366 ODC1P11926 461 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 CYP3A5P20815 502 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
COPA-205ENST00000541366 SEC13P55735 322 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 STRN3Q13033 797 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 TRIM29Q14134 588 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 ENOX2Q16206 610 aaKnown RBP12.78□□□□□ -0.36
COPA-205ENST00000541366 CC2D1AQ6P1N0 951 aaPredicted RBP12.78□□□□□ -0.36
COPA-205ENST00000541366 C19orf48Q6RUI8 117 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 ARMCX6Q7L4S7 300 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 TTC30AQ86WT1 665 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 FRMD1Q8N878 549 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 CD101Q93033 1021 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 FSCN3Q9NQT6 498 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
COPA-205ENST00000541366 MAGED2Q9UNF1 606 aaPredicted RBP12.78□□□□□ -0.36
COPA-205ENST00000541366 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 NEUROG3Q9Y4Z2 214 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 WNT6Q9Y6F9 365 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 ADAMTS20P59510 1910 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
COPA-205ENST00000541366 IGSF10Q6WRI0 2623 aa12.77□□□□□ -0.36
COPA-205ENST00000541366 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
COPA-205ENST00000541366 FAM189A1O60320 539 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 TADA3O75528 432 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
COPA-205ENST00000541366 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
COPA-205ENST00000541366 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
COPA-205ENST00000541366 FAM193AP78312 1265 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 SIM1P81133 766 aaPredicted RBP12.77□□□□□ -0.37
COPA-205ENST00000541366 ST3GAL1Q11201 340 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 FBXO43Q4G163 708 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 USP39Q53GS9 565 aaKnown RBP12.77□□□□□ -0.37
COPA-205ENST00000541366 C2orf27AQ580R0 203 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 SPATA1Q5VX52 437 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 JADE1Q6IE81 842 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 CCDC33Q8N5R6 958 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 ACDQ96AP0 544 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 NTPCRQ9BSD7 190 aaKnown RBP12.77□□□□□ -0.37
COPA-205ENST00000541366 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 MSRB2Q9Y3D2 182 aa12.77□□□□□ -0.37
COPA-205ENST00000541366 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 NPHP3-ACAD11A0A0J9YXS1 232 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 NFICP08651 508 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 PTGER3P43115 390 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 AMPD2Q01433 879 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 MTF1Q14872 753 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 PDGFRLQ15198 375 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 EML3Q32P44 896 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 C9orf57Q5W0N0 161 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 MON1AQ86VX9 555 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 RASSF3Q86WH2 238 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 TMEFF1Q8IYR6 380 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 CHCHD4Q8N4Q1 142 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 IGSF22Q8N9C0 903 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 USP33Q8TEY7 942 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 BICD1Q96G01 975 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 TRPC7Q9HCX4 862 aa12.76□□□□□ -0.37
COPA-205ENST00000541366 DUS2Q9NX74 493 aaKnown RBP12.76□□□□□ -0.37
COPA-205ENST00000541366 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
COPA-205ENST00000541366 ATXN2Q99700 1313 aaKnown RBP12.76□□□□□ -0.37
COPA-205ENST00000541366 FLNBO75369 2602 aaKnown RBP12.75□□□□□ -0.37
COPA-205ENST00000541366 K7EQS6 105 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 PIRO00625 290 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 CYB561D2O14569 222 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 CAPNS1P04632 268 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 CYP11A1P05108 521 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 PLS3P13797 630 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 ENGP17813 658 aa12.75□□□□□ -0.37
COPA-205ENST00000541366 ZRSR1Q15695 479 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms