RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 KIZQ2M2Z5 673 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ZNF449Q6P9G9 518 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 EPS8L1Q8TE68 723 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 SEMA4DQ92854 862 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 RMDN2Q96LZ7 410 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 EPB41L4BQ9H329 900 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 KLHL11Q9NVR0 708 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 GRHL1Q9NZI5 618 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 A6NJR5 290 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 COILP38432 576 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 RAB27AP51159 221 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 RAD23BP54727 409 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 KRT17Q04695 432 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 SLC13A5Q86YT5 568 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 TAB3Q8N5C8 712 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 CEP120Q8N960 986 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 ZBTB45Q96K62 511 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 CNOT10Q9H9A5 744 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 BATF3Q9NR55 127 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 DMAC2Q9NW81 257 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 VCANP13611 3396 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 GHRP10912 638 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 ADCY8P40145 1251 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 PAPOLAP51003 745 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 PDE6CP51160 858 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 ATP11AP98196 1134 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 PURAQ00577 322 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 NBPF20Q3BBV1 942 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 LHX8Q68G74 356 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 EIF1ADQ8N9N8 165 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 LMO3Q8TAP4 145 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 TAS1R2Q8TE23 839 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 POMGNT1Q8WZA1 660 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 KREMEN1Q96MU8 473 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 RPS6KC1Q96S38 1066 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 SYT15Q9BQS2 421 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 METTL5Q9NRN9 209 aaKnown RBP15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 ERAP1Q9NZ08 941 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 REV3LO60673 3130 aa15.12■□□□□ 0.01
SFSWAP-210ENST00000541286 MIF4GDA9UHW6 222 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 B4GALT5O43286 388 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 ADAMTS4O75173 837 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 SMIM10L2AP0DMW4 78 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 SMIM10L2BP0DMW5 78 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 GLRA2P23416 452 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 RFC5P40937 340 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 NPTX2P47972 431 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 RWDD2BP57060 319 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 ZNF268Q14587 947 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 ARHGEF2Q92974 986 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 SMARCAD1Q9H4L7 1026 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 CHST7Q9NS84 486 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 PTGIRP43119 386 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 GRIK4Q16099 956 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 SNRNP35Q16560 246 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 PPP1R15BQ5SWA1 713 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 KAZNQ674X7 775 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 RFX8Q6ZV50 586 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 PIGWQ7Z7B1 504 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 DNAJB3Q8WWF6 145 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 DLGAP2Q9P1A6 1054 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 RIPK2O43353 540 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 CHKAP35790 457 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 MTM1Q13496 603 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 MFSD10Q14728 455 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 C6orf118Q5T5N4 469 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 FAM160B1Q5W0V3 765 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 GSTA5Q7RTV2 222 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 RNF149Q8NC42 400 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 AKT3Q9Y243 479 aa15.11■□□□□ 0.01
SFSWAP-210ENST00000541286 SLC26A4O43511 780 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 NEFHP12036 1026 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 CHRNB2P17787 502 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 TARSP26639 723 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 HOXD10P28358 340 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 RPS6KA3P51812 740 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 COPS2P61201 443 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 BLMHQ13867 455 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 TARBP2Q15633 366 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 PPP2R5EQ16537 467 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 TMEM154Q6P9G4 183 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 C1orf131Q8NDD1 294 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 UCMAQ8WVF2 138 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 SLC7A3Q8WY07 619 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 TLCD1Q96CP7 247 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 C9orf72Q96LT7 481 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 SYT11Q9BT88 431 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 CDC42EP4Q9H3Q1 356 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 TMEM206Q9H813 350 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 SH3BP1Q9Y3L3 701 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 C2CD2Q9Y426 696 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 DENND3A2RUS2 1198 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 PODXLO00592 558 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 THAP12O43422 761 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 DUSP11O75319 330 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 GJB6O95452 261 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 CYP2C9P11712 490 aa15.1■□□□□ 0.01
SFSWAP-210ENST00000541286 CYP11B1P15538 503 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms