RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 HPDLQ96IR7 371 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 NRDE2Q9H7Z3 1164 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 UVRAGQ9P2Y5 699 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 AMFRQ9UKV5 643 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 NR2E3Q9Y5X4 410 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 F8W810 466 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 CLSTN1O94985 981 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 MYBL1P10243 752 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 RPL9P32969 192 aaKnown RBP13.25□□□□□ -0.29
SMAD3-204ENST00000540846 AARSP49588 968 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMAD3-204ENST00000540846 NOMO3P69849 1222 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 HTRA4P83105 476 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-204ENST00000540846 BRD3Q15059 726 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 PBKQ96KB5 322 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 PNKPQ96T60 521 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-204ENST00000540846 SDCBP2Q9H190 292 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 CWH43Q9H720 699 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 AVENQ9NQS1 362 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-204ENST00000540846 CISHQ9NSE2 258 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 PDE4DIPQ5VU43 2346 aa13.25□□□□□ -0.29
SMAD3-204ENST00000540846 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 CCDC151A5D8V7 595 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 PODXLO00592 558 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 KCNK3O14649 394 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 GJB5O95377 273 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ITGB1P05556 798 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 RHOXF2BP0C7M4 288 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 LINC00271P0C7V0 271 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 RGS19P49795 217 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 DNA2P51530 1060 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 LILRA4P59901 499 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 C2orf54Q08AI8 447 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ZNF667Q5HYK9 610 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 C9orf50Q5SZB4 431 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 NAA35Q5VZE5 725 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 MON1BQ7L1V2 547 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ABI1Q8IZP0 508 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 LRRC43Q8N309 656 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 UROC1Q96N76 676 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 GDF15Q99988 308 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 RHOXF2Q9BQY4 288 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 MRPL9Q9BYD2 267 aaKnown RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 FAM170AA1A519 330 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ZBBXA8MT70 800 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 THAP12O43422 761 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 PNPLA4P41247 253 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 TAF6P49848 677 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 WDR72Q3MJ13 1102 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 PAN2Q504Q3 1202 aaKnown RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 FAM117BQ6P1L5 589 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 WDR93Q6P2C0 686 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 SCARA5Q6ZMJ2 495 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 CMTR2Q8IYT2 770 aaKnown RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 MCOLN2Q8IZK6 566 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ZNF564Q8TBZ8 553 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 DDX27Q96GQ7 796 aaKnown RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-204ENST00000540846 SMYD3Q9H7B4 428 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 MARCH5Q9NX47 278 aa13.24□□□□□ -0.29
SMAD3-204ENST00000540846 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 KPNA7A9QM74 516 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 MIF4GDA9UHW6 222 aaKnown RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 DDX3YO15523 660 aaKnown RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 LSM8O95777 96 aaKnown RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 EFEMP2O95967 443 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 CD58P19256 250 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 SLC11A1P49279 550 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 MYO1EQ12965 1108 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 TMCO3Q6UWJ1 677 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 PHF13Q86YI8 300 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 HERC6Q8IVU3 1022 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 RASGEF1CQ8N431 466 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 PHOSPHO2Q8TCD6 241 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 ACTRT1Q8TDG2 376 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-204ENST00000540846 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 RUBCNQ92622 972 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 CYFIP2Q96F07 1278 aa13.23□□□□□ -0.29
SMAD3-204ENST00000540846 VCPIP1Q96JH7 1222 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms