RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SYKP43405 635 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 PPP3CCP48454 512 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 PSMD6Q15008 389 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 INTS6LQ5JSJ4 861 aaKnown RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 TANGO2Q6ICL3 276 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 VSTM1Q6UX27 236 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 TPRG1Q6ZUI0 275 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 PDCL2Q8N4E4 241 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 CELF5Q8N6W0 485 aaKnown RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
CDCA3-208ENST00000540683 CGRRF1Q99675 332 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
CDCA3-208ENST00000540683 SCN1AP35498 2009 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 DOCK6Q96HP0 2047 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 NOTCH4Q99466 2003 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 A0A1W2PQD8 194 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 PDXKO00764 312 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 TRIM66O15016 1216 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 CLSTN1O94985 981 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 STAU1O95793 577 aaKnown RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 DLATP10515 647 aaKnown RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 GDI1P31150 447 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 AFMP43652 599 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 CYP2J2P51589 502 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 NUCB2P80303 420 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 ENPEPQ07075 957 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 EHHADHQ08426 723 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 FCHO2Q0JRZ9 810 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 TEAD2Q15562 447 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 GPR158Q5T848 1215 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 ARID3BQ8IVW6 561 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 CCDC150Q8NCX0 1101 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 OR10T2Q8NGX3 314 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 SHKBP1Q8TBC3 707 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 SCFD1Q8WVM8 642 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 TCEAL4Q96EI5 215 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 TRMT2BQ96GJ1 504 aaKnown RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 MMS19Q96T76 1030 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 IMPG2Q9BZV3 1241 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 ZNF334Q9HCZ1 680 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 LTB4R2Q9NPC1 389 aa11.13□□□□□ -0.63
CDCA3-208ENST00000540683 SPATA6Q9NWH7 488 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-208ENST00000540683 TSC2P49815 1807 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 HEPACAM2A8MVW5 462 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 GABRDO14764 452 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 PI15O43692 258 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 TACC1O75410 805 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
CDCA3-208ENST00000540683 PFKFB1P16118 471 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 WARSP23381 471 aaKnown RBP11.12□□□□□ -0.63
CDCA3-208ENST00000540683 FCARP24071 287 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 CCR2P41597 374 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 KPNA1P52294 538 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-208ENST00000540683 CYP24A1Q07973 514 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 BIRC3Q13489 604 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 DGKKQ5KSL6 1271 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 VITQ6UXI7 678 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 RALGPS2Q86X27 583 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-208ENST00000540683 TMC8Q8IU68 726 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 CBWD2Q8IUF1 395 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 NELFCDQ8IXH7 590 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 SYNPOQ8N3V7 929 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 KIAA1958Q8N8K9 716 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 BPIFB1Q8TDL5 484 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 FAM3CQ92520 227 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 TAF4BQ92750 862 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 CCDC127Q96BQ5 260 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 PAGE5Q96GU1 130 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 RPP25Q9BUL9 199 aaKnown RBP11.12□□□□□ -0.63
CDCA3-208ENST00000540683 DNAJC25Q9H1X3 360 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 SLC39A2Q9NP94 309 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 RMND1Q9NWS8 449 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 L1RE1Q9UN81 338 aa11.12□□□□□ -0.63
CDCA3-208ENST00000540683 NUP210Q8TEM1 1887 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 IKBKBO14920 756 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 MAPK13O15264 365 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 TGFB1I1O43294 461 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 STX10O60499 249 aa11.11□□□□□ -0.63
CDCA3-208ENST00000540683 KINO60870 393 aaKnown RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 DCNP07585 359 aaKnown RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-208ENST00000540683 CCR3P51677 355 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms