RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 SCFD1Q8WVM8 642 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 CCDC127Q96BQ5 260 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 PAGE5Q96GU1 130 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 GCNAQ96QF7 691 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 MMS19Q96T76 1030 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 ACBD6Q9BR61 282 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 PI4K2AQ9BTU6 479 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 OSBPL6Q9BZF3 934 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 ZNF334Q9HCZ1 680 aaPredicted RBP9.68□□□□□ -0.86
LMO3-222ENST00000540445 AGPAT3Q9NRZ7 376 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 TMLHEQ9NVH6 421 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 GDAP2Q9NXN4 497 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 GTF3C4Q9UKN8 822 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 L1RE1Q9UN81 338 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
LMO3-222ENST00000540445 MRPS17Q9Y2R5 130 aaKnown RBP9.68□□□□□ -0.86
LMO3-222ENST00000540445 ATP6V1DQ9Y5K8 247 aa9.68□□□□□ -0.86
LMO3-222ENST00000540445 GVINP1Q7Z2Y8 2422 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 OTOGLQ3ZCN5 2332 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 NCANO14594 1321 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 UBE4BO95155 1302 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 EXOC3O60645 756 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 PHACTR2O75167 634 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 CLSTN1O94985 981 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 ATF6P18850 670 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 CMA1P23946 247 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 CYP2F1P24903 491 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 CDC25CP30307 473 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 PSMD2Q13200 908 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 TRPC3Q13507 836 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 SOWAHAQ2M3V2 549 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 STXBP5Q5T5C0 1151 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 DPH6Q7L8W6 267 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 TRAPPC11Q7Z392 1133 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 SPATA2LQ8IUW3 424 aaPredicted RBP9.67□□□□□ -0.86
LMO3-222ENST00000540445 WDR49Q8IV35 697 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 ADGRF2Q8IZF7 708 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 TOP6BLQ8N6T0 577 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 DEPDC1BQ8WUY9 529 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 LEO1Q8WVC0 666 aaPredicted RBP9.67□□□□□ -0.86
LMO3-222ENST00000540445 DNASE1L2Q92874 299 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 NKD2Q969F2 451 aaPredicted RBP9.67□□□□□ -0.86
LMO3-222ENST00000540445 TASP1Q9H6P5 420 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 TRPV4Q9HBA0 871 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 LTB4R2Q9NPC1 389 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 EXOC1Q9NV70 894 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 SPATA6Q9NWH7 488 aaPredicted RBP9.67□□□□□ -0.86
LMO3-222ENST00000540445 CGNQ9P2M7 1197 aaKnown RBP9.67□□□□□ -0.86
LMO3-222ENST00000540445 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 SIX4Q9UIU6 781 aa9.67□□□□□ -0.86
LMO3-222ENST00000540445 NDRG2Q9UN36 371 aaKnown RBP9.67□□□□□ -0.86
LMO3-222ENST00000540445 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 HELZP42694 1942 aaKnown RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 PTPRJQ12913 1337 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 MAN2B1O00754 1011 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 LAMTOR5O43504 91 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 CST3P01034 146 aaPredicted RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 PDGFRBP09619 1106 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 SP9P0CG40 484 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 PFKFB1P16118 471 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 LMO2P25791 158 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 TARSP26639 723 aaKnown RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 PCSK1P29120 753 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 SYKP43405 635 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 GPR15P49685 360 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 KPNA1P52294 538 aaPredicted RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 RPL10AP62906 217 aaKnown RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 CYP4F8P98187 520 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 CYP24A1Q07973 514 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 EHHADHQ08426 723 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 FZD5Q13467 585 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 DDR2Q16832 855 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 INTS6LQ5JSJ4 861 aaKnown RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 SDHAF4Q5VUM1 108 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 OSTM1Q86WC4 334 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 SCN4BQ8IWT1 228 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 CXorf38Q8TB03 319 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 FAM3CQ92520 227 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 CLDN23Q96B33 292 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 CHAMP1Q96JM3 812 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 MKNK1Q9BUB5 465 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 SCAND2PQ9GZW5 306 aaPredicted RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 SNX25Q9H3E2 840 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 SEMA4AQ9H3S1 761 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 MAGEC2Q9UBF1 373 aaPredicted RBP9.66□□□□□ -0.86
LMO3-222ENST00000540445 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
LMO3-222ENST00000540445 EP300Q09472 2414 aaPredicted RBP9.65□□□□□ -0.86
LMO3-222ENST00000540445 MYBPHLA2RUH7 354 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 GABRDO14764 452 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 CHADO15335 359 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 HCRTO43612 131 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 ACTN4O43707 911 aaKnown RBP9.65□□□□□ -0.86
LMO3-222ENST00000540445 ATP2C2O75185 946 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 CSH1P0DML2 217 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 CSH2P0DML3 217 aa9.65□□□□□ -0.86
LMO3-222ENST00000540445 CCNE1P24864 410 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms