RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 NR1H3Q13133 447 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 ELF2Q15723 593 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 CCDC6Q16204 474 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 TXNDC8Q6A555 127 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 TRIM68Q6AZZ1 485 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 FSTL4Q6MZW2 842 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 LRRTM3Q86VH5 581 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 MON1AQ86VX9 555 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
COPS7A-211ENST00000540408 LARP4BQ92615 738 aaKnown RBP13.45□□□□□ -0.26
COPS7A-211ENST00000540408 RAD54LQ92698 747 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 ZC3H10Q96K80 434 aaKnown RBP13.45□□□□□ -0.26
COPS7A-211ENST00000540408 P2RY13Q9BPV8 354 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 ST6GALNAC4Q9H4F1 302 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 HPS4Q9NQG7 708 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 VPS45Q9NRW7 570 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 STYXL1Q9Y6J8 313 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 HUS1O60921 280 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 EGFP01133 1207 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
COPS7A-211ENST00000540408 PLCG1P19174 1290 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 GJB2P29033 226 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 DDIT3P35638 169 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 GALK1P51570 392 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 MYL7Q01449 175 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 ZNF268Q14587 947 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-211ENST00000540408 KARSQ15046 597 aaKnown RBP13.44□□□□□ -0.26
COPS7A-211ENST00000540408 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-211ENST00000540408 STPG1Q5TH74 334 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 FSIP1Q8NA03 581 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 KIF2CQ99661 725 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 ACBD6Q9BR61 282 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 PI4K2AQ9BTU6 479 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 BLOC1S4Q9NUP1 217 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 CCL26Q9Y258 94 aa13.44□□□□□ -0.26
COPS7A-211ENST00000540408 R3HCC1Q9Y3T6 440 aaKnown RBP13.44□□□□□ -0.26
COPS7A-211ENST00000540408 SPTBN2O15020 2390 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TPRP12270 2363 aaKnown RBP13.43□□□□□ -0.26
COPS7A-211ENST00000540408 LDHAP00338 332 aaKnown RBP13.43□□□□□ -0.26
COPS7A-211ENST00000540408 USP17L7P0C7H9 530 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 ARSAP15289 507 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 MPLP40238 635 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TFAMQ00059 246 aaKnown RBP13.43□□□□□ -0.26
COPS7A-211ENST00000540408 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 PSMD2Q13200 908 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 RABEP1Q15276 862 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 N4BP2L1Q5TBK1 243 aaPredicted RBP13.43□□□□□ -0.26
COPS7A-211ENST00000540408 RNF43Q68DV7 783 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 PKN3Q6P5Z2 889 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 SYT13Q7L8C5 426 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 ZNF720Q7Z2F6 126 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TMEM150AQ86TG1 271 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TMEM86AQ8N2M4 240 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TTC16Q8NEE8 873 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 CD101Q93033 1021 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 ATP2A3Q93084 1043 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 ACDQ96AP0 544 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 FIZ1Q96SL8 496 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 ECT2Q9H8V3 914 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TRPC7Q9HCX4 862 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 ABCB6Q9NP58 842 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 DUS2Q9NX74 493 aaKnown RBP13.43□□□□□ -0.26
COPS7A-211ENST00000540408 DDX43Q9NXZ2 648 aaKnown RBP13.43□□□□□ -0.26
COPS7A-211ENST00000540408 CCDC39Q9UFE4 941 aa13.43□□□□□ -0.26
COPS7A-211ENST00000540408 TRAV19A0A0A6YYK7 116 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 OTOL1A6NHN0 477 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-211ENST00000540408 TM4SF5O14894 197 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 APBB3O95704 486 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 CKMP06732 381 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 HOXC13P31276 330 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 GJA4P35212 333 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 IFNAR2P48551 515 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 MTF1Q14872 753 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 DDR2Q16832 855 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 PLK5Q496M5 336 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 PLA2G2CQ5R387 149 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
COPS7A-211ENST00000540408 C11orf74Q86VG3 221 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 SPATA2LQ8IUW3 424 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-211ENST00000540408 RPLP0P6Q8NHW5 317 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-211ENST00000540408 OSCP1Q8WVF1 389 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 TRMT2BQ96GJ1 504 aaKnown RBP13.42□□□□□ -0.26
COPS7A-211ENST00000540408 HHIPQ96QV1 700 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 TMEM206Q9H813 350 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 MRPL44Q9H9J2 332 aaKnown RBP13.42□□□□□ -0.26
COPS7A-211ENST00000540408 SEL1LQ9UBV2 794 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 AGAP1Q9UPQ3 857 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 SMC3Q9UQE7 1217 aa13.42□□□□□ -0.26
COPS7A-211ENST00000540408 ACACBO00763 2458 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 TISP43B9A030 160 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 KCNK5O95279 499 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 CAVIN2O95810 425 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 ITGB3P05106 788 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 CYP2F1P24903 491 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 PCSK1P29120 753 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 PMLP29590 882 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms