RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NET1Q7Z628 596 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 C12orf50Q8NA57 414 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SH3TC2Q8TF17 1288 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 CRAMP1Q96RY5 1269 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 FGFBP2Q9BYJ0 223 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 LGALS13Q9UHV8 139 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 INO80B-WBP1J3KQ70 363 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 M0QYV0 167 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.239e-6■■■■□ 24.8
DNMT1-203ENST00000540357 SDC4P31431 198 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 FAM102AQ5T9C2 384 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 SETD3Q86TU7 594 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 GRHL1Q9NZI5 618 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 CDY2AQ9Y6F7 541 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 NPTXRO95502 500 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 APRTP07741 180 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 CYP3A4P08684 503 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 ADRA1DP25100 572 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 MMP14P50281 582 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 R3HDM1Q15032 1099 aaKnown RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 MAPRE2Q15555 327 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 CWF19L1Q69YN2 538 aaKnown RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 C16orf87Q6PH81 154 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 OTOP1Q7RTM1 612 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 TRABD2AQ86V40 505 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 KCNK4Q9NYG8 393 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 PRPF4O43172 522 aaKnown RBP eCLIP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 MAML3Q96JK9 1138 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 RMDN2Q96LZ7 410 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 TMEM121Q9BTD3 319 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 KCNQ2O43526 872 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 ZNF189O75820 626 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 IL1R1P14778 569 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 GARTP22102 1010 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 TTC8Q8TAM2 541 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 DMAP1Q9NPF5 467 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-203ENST00000540357 ADA2Q9NZK5 511 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 TTLL3Q9Y4R7 772 aa13.6□□□□□ -0.23
DNMT1-203ENST00000540357 GSTT1P30711 240 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 CYP24A1Q07973 514 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 TTC39CQ8N584 583 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 TDRD3Q9H7E2 651 aaKnown RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 AGAP1Q9UPQ3 857 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 PIK3R2O00459 728 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ACOT2P49753 483 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 OTUD4Q01804 1114 aaKnown RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 PARD3BQ8TEW8 1205 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 PFDN4Q9NQP4 134 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 NMRK1Q9NWW6 199 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 GCLCP48506 637 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 SOX13Q9UN79 622 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 DUOX1Q9NRD9 1551 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 TGFB1I1O43294 461 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 CIITAP33076 1130 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 CYTH1Q15438 398 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 JADE1Q6IE81 842 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 SH2D3AQ9BRG2 576 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 MRGBPQ9NV56 204 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-203ENST00000540357 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
DNMT1-203ENST00000540357 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.23
DNMT1-203ENST00000540357 CLPTM1O96005 669 aa13.58□□□□□ -0.23
DNMT1-203ENST00000540357 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.23
DNMT1-203ENST00000540357 PRPF31Q8WWY3 499 aaKnown RBP13.58□□□□□ -0.23
DNMT1-203ENST00000540357 GORASP1Q9BQQ3 440 aa13.58□□□□□ -0.23
DNMT1-203ENST00000540357 SLC5A4Q9NY91 659 aa13.58□□□□□ -0.23
DNMT1-203ENST00000540357 COG5Q9UP83 839 aa13.58□□□□□ -0.23
DNMT1-203ENST00000540357 DRG1Q9Y295 367 aaKnown RBP13.58□□□□□ -0.23
DNMT1-203ENST00000540357 MAPK6Q16659 721 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 GPAT2Q6NUI2 795 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 TTC27Q6P3X3 843 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 SV2AQ7L0J3 742 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 ADAMTS3O15072 1205 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms