RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
USP10-202ENST00000540269 PIK3R2O00459 728 aa13.07□□□□□ -0.32
USP10-202ENST00000540269 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
USP10-202ENST00000540269 HBP1O60381 514 aa13.07□□□□□ -0.32
USP10-202ENST00000540269 DYNLT1P63172 113 aa13.07□□□□□ -0.32
USP10-202ENST00000540269 TAPT1Q6NXT6 567 aa13.07□□□□□ -0.32
USP10-202ENST00000540269 ROPN1BQ9BZX4 212 aaPredicted RBP13.07□□□□□ -0.32
USP10-202ENST00000540269 RPF1Q9H9Y2 349 aaKnown RBP13.07□□□□□ -0.32
USP10-202ENST00000540269 ROPN1Q9HAT0 212 aaPredicted RBP13.07□□□□□ -0.32
USP10-202ENST00000540269 TMEM120BA0PK00 339 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 LGALS2P05162 132 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 CYP3A5P20815 502 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 ARSEP51690 589 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 NRLP54845 237 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 GDF10P55107 478 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 SLC10A6Q3KNW5 377 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 MAP1SQ66K74 1059 aaPredicted RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 ALLCQ8N6M5 410 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 CCDC89Q8N998 374 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 PIWIL1Q96J94 861 aaKnown RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 RBM15Q96T37 977 aaKnown RBP eCLIP13.06□□□□□ -0.321e-7■■■□□ 14.6
USP10-202ENST00000540269 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 PPME1Q9Y570 386 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 KIAA0754O94854 1291 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 PSMA2P25787 234 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 GCAP28676 217 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 SH3PXD2AQ5TCZ1 1133 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 YTHDF3Q7Z739 585 aaKnown RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 LINC01465Q8N7H1 131 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 HOMER3Q9NSC5 361 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 EURLQ9NYK6 297 aa13.06□□□□□ -0.32
USP10-202ENST00000540269 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
USP10-202ENST00000540269 ATP2C2O75185 946 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 ARF4P18085 180 aaPredicted RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 MAGEA4P43358 317 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 PSMC1P62191 440 aaKnown RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 GPS1Q13098 491 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 MTM1Q13496 603 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 SURF1Q15526 300 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 ZNF667Q5HYK9 610 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 TRNP1Q6NT89 227 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 KCNV1Q6PIU1 500 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 CAPN12Q6ZSI9 719 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 NIPA2Q8N8Q9 360 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 AFG1LQ8WV93 481 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 CABS1Q96KC9 395 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 NAALADL1Q9UQQ1 740 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 DNALI1O14645 258 aaPredicted RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 FSBPO95073 299 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 KRT3P12035 628 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 TFDP1Q14186 410 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 TTLL4Q14679 1199 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 TFDP3Q5H9I0 405 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 SPATS2Q86XZ4 545 aaKnown RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 ZCCHC9Q8N567 271 aaKnown RBP13.05□□□□□ -0.32
USP10-202ENST00000540269 ANKRD42Q8N9B4 389 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 UBA3Q8TBC4 463 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 SAYSD1Q9NPB0 183 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 PCSK1NQ9UHG2 260 aa13.05□□□□□ -0.32
USP10-202ENST00000540269 SIGLEC16A6NMB1 481 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 PIAS1O75925 651 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 MICAL2O94851 1124 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 TJP3O95049 919 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 POLR2BP30876 1174 aaKnown RBP13.04□□□□□ -0.32
USP10-202ENST00000540269 ADCYAP1R1P41586 468 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 VCPP55072 806 aaKnown RBP13.04□□□□□ -0.32
USP10-202ENST00000540269 CAV1Q03135 178 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
USP10-202ENST00000540269 GKAP1Q5VSY0 366 aaPredicted RBP13.04□□□□□ -0.32
USP10-202ENST00000540269 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 DPH6Q7L8W6 267 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 SLC35B2Q8TB61 432 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 GOLGA8MH3BSY2 632 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 ASAP2O43150 1006 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 CILPO75339 1184 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 IFNB1P01574 187 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■■■■□ 23.6
USP10-202ENST00000540269 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
USP10-202ENST00000540269 SLC20A2Q08357 652 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
USP10-202ENST00000540269 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
USP10-202ENST00000540269 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms