RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 STYXL1Q9Y6J8 313 aa21.54■■□□□ 1.04
LPCAT3-210ENST00000540090 ARSAP15289 507 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 MPLP40238 635 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 DHX8Q14562 1220 aaKnown RBP21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 ZNF268Q14587 947 aaPredicted RBP21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 PLK5Q496M5 336 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 FBXO43Q4G163 708 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 ADALQ6DHV7 355 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 SLFN12LQ6IEE8 588 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 CC2D1AQ6P1N0 951 aaPredicted RBP21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 SMOC1Q9H4F8 434 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 BLOC1S4Q9NUP1 217 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 KIF3AQ9Y496 699 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 PCDHB5Q9Y5E4 795 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 GREB1Q4ZG55 1949 aa21.53■■□□□ 1.04
LPCAT3-210ENST00000540090 KPNA7A9QM74 516 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 KCNK5O95279 499 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 UBA7P41226 1012 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 PDGFRLQ15198 375 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 MRPS31Q92665 395 aaKnown RBP21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 CALML4Q96GE6 196 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 P2RY13Q9BPV8 354 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 DUSP15Q9H1R2 295 aaPredicted RBP21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 TMLHEQ9NVH6 421 aa21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 AGO2Q9UKV8 859 aaKnown RBP21.52■■□□□ 1.04
LPCAT3-210ENST00000540090 SPAG17Q6Q759 2223 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 TISP43B9A030 160 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 CSH1P0DML2 217 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 CSH2P0DML3 217 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 GJA4P35212 333 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 GPR15P49685 360 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 NFE2Q16621 373 aaPredicted RBP21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 SYT13Q7L8C5 426 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 EXOC4Q96A65 974 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 HHIPQ96QV1 700 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 ST6GALNAC4Q9H4F1 302 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 ZHX3Q9H4I2 956 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 EBF1Q9UH73 591 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 SCN1AP35498 2009 aa21.51■■□□□ 1.03
LPCAT3-210ENST00000540090 CHD6Q8TD26 2715 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 LAMA1P25391 3075 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 PRPF40AO75400 957 aaKnown RBP21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 KRT18P05783 430 aaKnown RBP21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 TSPY1Q01534 308 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 MCM6Q14566 821 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 SV2CQ496J9 727 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 ZC2HC1CQ53FD0 456 aaPredicted RBP21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 RNF43Q68DV7 783 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 NAIF1Q69YI7 327 aaPredicted RBP21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 CRELD2Q6UXH1 353 aaPredicted RBP21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 NT5DC4Q86YG4 428 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 EFCAB13Q8IY85 973 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 RAD54LQ92698 747 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 PI4K2AQ9BTU6 479 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 ECT2Q9H8V3 914 aa21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 MAGED2Q9UNF1 606 aaPredicted RBP21.5■■□□□ 1.03
LPCAT3-210ENST00000540090 KIF26AQ9ULI4 1882 aaPredicted RBP21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 RHOBTB1O94844 696 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 FAM160A1Q05DH4 1040 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 MTF1Q14872 753 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 CPA6Q8N4T0 437 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 RPLP0P6Q8NHW5 317 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 LEO1Q8WVC0 666 aaPredicted RBP21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 EZH1Q92800 747 aaPredicted RBP21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 MYRFLQ96LU7 910 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 PPP4R2Q9NY27 417 aa21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 UXTQ9UBK9 157 aaPredicted RBP21.49■■□□□ 1.03
LPCAT3-210ENST00000540090 TSC2P49815 1807 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 ATG2BQ96BY7 2078 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 TBCAO75347 108 aaKnown RBP21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 TADA3O75528 432 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 NOL4O94818 638 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 APBB3O95704 486 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 PNPLA4P41247 253 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 KARSQ15046 597 aaKnown RBP21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 ELF2Q15723 593 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 SDHAF4Q5VUM1 108 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 TCEAL6Q6IPX3 200 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 STKLD1Q8NE28 680 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 OSCP1Q8WVF1 389 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 TCEAL3Q969E4 200 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 ZNF560Q96MR9 790 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 ACBD6Q9BR61 282 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 ABCB6Q9NP58 842 aa21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 DUS2Q9NX74 493 aaKnown RBP21.48■■□□□ 1.03
LPCAT3-210ENST00000540090 DCLK1O15075 740 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 IL18RAPO95256 599 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 CAVIN2O95810 425 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 NEFLP07196 543 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 PLCG1P19174 1290 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 ADSSP30520 456 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 RPL10AP62906 217 aaKnown RBP21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 DMC1Q14565 340 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 POSTNQ15063 836 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 ZNF77Q15935 545 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 DDR2Q16832 855 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 ZNF720Q7Z2F6 126 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 PDCL2Q8N4E4 241 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 CD101Q93033 1021 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 TRMT2BQ96GJ1 504 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms